SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 103612 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

103612 - SBT domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   0
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Macropus_eugenii_76_1.0   (Tammar wallaby)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Saccoglossus_kowalevskii_v3.0 0
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   0
Ficedula_albicollis_76_1.0   (Collared flycatcher)   0
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Oreochromis_niloticus_76_1.0   (Nile tilapia)   0
Danio_rerio_76_9   (Zebrafish)   0
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   0
Helobdella_robusta_ 0
Solenopsis_invicta_v.2.2.3   (Red fire ant)   0
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   0
Drosophila_simulans_1.3 0
Pristionchus_pacificus_ 0
Meloidogyne_incognita_   (Southern root-knot nematode)   0
Meloidogyne_hapla_ 0
Caenorhabditis_japonica_ 0
Caenorhabditis_elegans_76_235   (Roundworm)   0
Caenorhabditis_briggsae_2 0
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   0
Hydra_vulgaris 0
Trichoplax_adhaerens_ 0
Conidiobolus_coronatus_NRRL28638_v1.0 0
Phycomyces_blakesleeanus_ 0
Rhizopus_oryzae_RA_99-880_ 0
Mucor_circinelloides_ 0
Sporisorium_reilianum_22 0
Sphaerobolus_stellatus_v1.0 0
Serpula_lacrymans_var._lacrymans_S7.9_ 0
Paxillus_rubicundulus_Ve08.2h10_v1.0 0
Pisolithus_microcarpus_441_v1.0 0
Amanita_muscaria_Koide_v1.0   (Fly agaric)   0
Laccaria_bicolor_S238N-H82_ 0
Heterobasidion_annosum_ 0
Sebacina_vermifera_MAFF_305830_v1.0 0
Tulasnella_calospora_AL13/4D_v1.0 0
Postia_placenta_ 0
Magnaporthe_grisea_70-15_ 0
Glomerella_graminicola_22 0
Fusarium_verticillioides_7600_ 0
Trichoderma_harzianum_CBS_226.95_v1.0 0
Leptosphaeria_maculans_22 0
Zasmidium_cellare_ATCC_36951_v1.0 0
Dothistroma_septosporum 0
Aspergillus_zonatus_v1.0 0
Aspergillus_nidulans_FGSC_A4_ 0
Aspergillus_sydowii_v1.0 0
Aspergillus_carbonarius_ITEM_5010_ 0
Aspergillus_wentii_v1.0 0
Saccharomyces_mikatae_MIT 0
Entamoeba_invadens_1.2 0
Selaginella_moellendorffii_ 20
Pinus_taeda   (Loblolly pine)   0
Picea_abies   (Norway spruce)   0
Eucalyptus_grandis_v201   (Rose gum)   0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Gossypium_raimondii_v221 0
Citrus_clementina_v165 0
Citrus_sinensis_v154   (Sweet orange)   0
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Capsella_rubella_v183 0
Arabidopsis_lyrata_   (Lyrate rockcress)   0
Arabidopsis_thaliana_10   (Thale cress)   0
Carica_papaya_   (Papaya)   0
Medicago_truncatula_   (Barrel medic)   0
Phaseolus_vulgaris_v186   (French bean)   0
Glycine_max_v109   (Soybean)   3
Cucumis_sativus_v122   (Cucumber)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   0
Linum_usitatissimum_v200   (Flax)   0
Manihot_esculenta_v147   (Cassava)   1
Populus_trichocarpa_v156   (Black cottonwood)   2
Vitis_vinifera_   (Wine grape)   0
Mimulus_guttatus_v140   (Spotted monkey flower)   0
Solanum_lycopersicum_v.2.3   (Tomato)   0
Solanum_tuberosum_   (Potato)   0
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 3
Triticum_urartu_22 2
Triticum_aestivum_22   (Bread wheat)   3
Aegilops_tauschii_22 0
Brachypodium_distachyon_   (Stiff brome)   0
Oryza_barthii_22   (African wild rice)   0
Oryza_meridionalis_22 0
Oryza_glumaepatula_22 0
Oryza_glaberrima   (African rice)   0
Oryza_punctata_22 1
Oryza_nivara_22 0
Oryza_brachyantha_22   (Malo sina)   0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   0
Panicum_virgatum_v202   (Switchgrass)   0
Setaria_italica_v164   (Foxtail millet)   0
Zea_mays_subsp._mays_   (Maize)   1
Zea_mays_v181   (Maize)   2
Sorghum_bicolor_   (Sorghum)   0
Musa_balbisiana   (Balbis banana)   0
Musa_acuminata_22   (Wild Malaysian banana)   0
Amborella_trichopoda_22 0
Physcomitrella_patens 5
Coccomyxa_subellipsoidea_sp._C-169_v2 0
Asterochloris_sp._Cgr/DA1pho_v1.0 4
Chlorella_variabilis_sp._NC64A_ 5
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 15
Volvox_carteri_v199 2
Chlamydomonas_reinhardtii_4.0 13
Ostreococcus_sp._RCC809_ 0
Ostreococcus_lucimarinus_CCE9901_ 0
Ostreococcus_tauri_ 0
Bathycoccus_prasinos_ 0
Micromonas_sp._RCC299_ 0
Micromonas_pusilla_CCMP1545_v3.0 0
Ectocarpus_siliculosus 0
Albugo_laibachii_22 0
Pythium_iwayamai_DAOM_BR242034_22 0
Pythium_arrhenomanes_ATCC_12531_22 0
Pythium_aphanidermatum_DAOM_BR444_22 0
Pythium_irregulare_DAOM_BR486_22 0
Pythium_vexans_DAOM_BR484_22 0
Phytophthora_ramorum_1.1   (Sudden oak death agent)   0
Phytophthora_infestans_T30-4_ 0
Phytophthora_capsici_ 0
Phaeodactylum_tricornutumCCAP_1055/1 0
Fragilariopsis_cylindrus 0
Paramecium_tetraurelia_ 0
Tetrahymena_thermophila_SB210_1_ 0
Plasmodium_falciparum_3D7_ 0
Plasmodium_knowlesi_strain_H_ 0
Plasmodium_chabaudi_ 0
Symbiodinium_minutum_clade_B1_v1.2 0
Naegleria_gruberi_ 0
Guillardia_theta_CCMP2712_v1.0_ 0
Nostoc_punctiforme_PCC_73102 0
Nostoc_sp._PCC_7524 0
Blastococcus_saxobsidens_DD2 0
Geodermatophilus_obscurus_DSM_43160 0
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Actinoplanes_missouriensis_431 0
Segniliparus_rotundus_DSM_44985 0
Rothia_dentocariosa_ATCC_17931 0
Desulfotomaculum_ruminis_DSM_2154 0
Coprococcus_sp._ART55/1 0
Moorella_thermoacetica_ATCC_39073 0
Leuconostoc_gasicomitatum_LMG_18811 0
Streptococcus_gallolyticus_UCN34 0
Streptococcus_pasteurianus_ATCC_43144 0
Streptococcus_infantarius_subsp._infantarius_CJ18 0
Streptococcus_macedonicus_ACA-DC_198 0
Bacteroides_helcogenes_P_36-108 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Waddlia_chondrophila_WSU_86-1044 0
Candidatus_Protochlamydia_amoebophila_UWE25 0
Parachlamydia_acanthamoebae_UV-7 0
Simkania_negevensis_Z 0
Spirochaeta_caldaria_DSM_7334 0
Hippea_maritima_DSM_10411 0
Burkholderia_xenovorans_LB400 0
Mesorhizobium_opportunistum_WSM2075 0
Vibrio_splendidus_LGP32 0
Photobacterium_profundum_SS9 0
Alteromonas_macleodii_str._'Deep_ecotype' 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Halorhabdus_utahensis_DSM_12940 0
Halobacterium_salinarum_R1 0
Halobacterium_sp._NRC-1 0
Methanothermus_fervidus_DSM_2088 0

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Strains
Genome     Number
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   0
Coccidioides_posadasii_str._Silveira_ 0
Coccidioides_immitis_RMSCC_3703_ 0
Coccidioides_immitis_RMSCC_2394_ 0
Coccidioides_immitis_H538.4_ 0
Saccharomyces_cerevisiae_FostersB 0
Batrachochytrium_dendrobatidis_JEL423_ 0
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   0
Hordeum_vulgare_22   (Domesticated barley)   0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Plasmodium_falciparum_Dd2_ 0
Chamaesiphon_minutus_PCC_6605 0
Oscillatoria_acuminata_PCC_6304 0
Calothrix_parietina_Calothrix_sp._PCC_6303 0
Cylindrospermum_stagnale_PCC_7417 0
Candidatus_Phytoplasma_australiense_Strawberry_lethal_yellows_phytoplasma_(CPA)_str._NZSb11 0
Candidatus_Phytoplasma_australiense 0
Nocardiopsis_alba_ATCC_BAA-2165 0
Streptomyces_fulvissimus_DSM_40593 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Desulfotomaculum_gibsoniae_DSM_7213 0
Lactobacillus_reuteri_TD1 0
Lactobacillus_reuteri_SD2112 0
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 0
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 0
Streptococcus_lutetiensis_033 0
Bacillus_thuringiensis_HD-789 0
Fibrobacter_succinogenes_subsp._succinogenes_S85 0
Rhizobium_leguminosarum_bv._trifolii_WSM2304 0
Bradyrhizobium_oligotrophicum_S58 0
Haemophilus_influenzae_PittGG 0
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 0
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U7' 0
Alteromonas_macleodii_str._'Ionian_Sea_U4' 0
Alteromonas_macleodii_str._'English_Channel_615' 0
Alteromonas_macleodii_AltDE1 0
Shigella_dysenteriae_1617 0
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 0

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Longest transcript per gene
Genome     Number
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Macropus_eugenii_69_1.0   (Tammar wallaby)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   0
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Oreochromis_niloticus_69_1.0   (Nile tilapia)   0
Danio_rerio_69_9   (Zebrafish)   0
Caenorhabditis_elegans_69_215   (Roundworm)   0
Arabidopsis_thaliana_10   (Thale cress)   0

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   0
Loa_loa_v3.3_(Request)   (Eye worm)   0
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   0
Picea_sitchensis__(Incomplete)   (Sitka spruce)   0
Lotus_japonicus__(Early_assembly) 2
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   0
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   0
Phoenix_dactylifera__(Early_draft)   (Date palm)   0
NCBI_plasmid_sequences_(Plasmids) 0
PDB_chains_(SCOP_1.75)_(PDB) 3
Uniprot_2018_03_genome 136
NCBI_2017_08_genome 72
NCBI_viral_sequences_(Viral) 0
Protein_Data_Bank_(all_PDB_sequenc) 3
TargetDB__(Targets) 3
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 9
Protozoadb_2010_08_(Protozoadb) 0
UniProt__viral_sequences_(Viral) 0
STRING_v9.0.5_(STRING) 32

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