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Domain combinations for 48452,48452,48452,48452,48452,48452,48452,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

48452 - TPR-like
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Macaca_mulatta_76_1   (Rhesus monkey)   1
Mus_musculus_76_38   (House mouse)   2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   1
Tupaia_belangeri_76   (Northern tree shrew)   0
Canis_familiaris_76_3.1   (Dog)   1
Myotis_lucifugus_76_2.0   (Little brown bat)   1
Pteropus_vampyrus_76_1   (Large flying fox)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1
Meleagris_gallopavo_76_2   (Turkey)   1
Gallus_gallus_76_4   (Chicken)   1
Anas_platyrhynchos_76_1.0   (Mallard)   1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1
Poecilia_formosa_76   (Amazon molly)   1
Ciona_intestinalis_76   (Vase tunicate)   1
Danaus_plexippus_OGS1.0   (Monarch butterfly)   1
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   2
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   1
Linepithema_humile_v1.1   (Argentine ant)   1
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1
Lucilia_cuprina   (Australian sheep blowfly)   1
Drosophila_willistoni_1.3 1
Drosophila_suzukii 1
Drosophila_yakuba_1.3 1
Drosophila_melanogaster_76_5   (Fruit fly)   2
Drosophila_erecta_1.3 1
Drosophila_ananassae_1.3 1
Drosophila_virilis_1.2 1
Drosophila_mojavensis_1.3 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1
Tribolium_castaneum_3.0   (Red flour beetle)   1
Rhodnius_prolixus_22 1
Strigamia_maritima_22 1
Sarcoptes_scabiei 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1
Acropora_digitifera_v1.0 0
Nematostella_vectensis_1.0   (Starlet sea anemone)   1
Trichoplax_adhaerens_ 0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Oryza_barthii_22   (African wild rice)   1
Symbiodinium_minutum_clade_B1_v1.2 0
Microcoleus_sp._PCC_7113 1
Trichodesmium_erythraeum_IMS101 1
Nostoc_sp._PCC_7107 1
Frankia_alni_ACN14a 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 0
Haliangium_ochraceum_DSM_14365 0
Sorangium_cellulosum_'So_ce_56' 0
Stigmatella_aurantiaca_DW4/3-1 0
Myxococcus_fulvus_HW-1 0

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Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   1
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1
Oscillatoria_acuminata_PCC_6304 1
Arthrospira_platensis_NIES-39 1
Calothrix_parietina_Calothrix_sp._PCC_6303 0
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 0
Sorangium_cellulosum_So0157-2 0
Myxococcus_stipitatus_DSM_14675 0

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Macaca_mulatta_69_1   (Rhesus monkey)   1
Mus_musculus_69_38   (House mouse)   1
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   1
Tupaia_belangeri_69   (Northern tree shrew)   0
Canis_familiaris_69_3.1   (Dog)   1
Myotis_lucifugus_69_2.0   (Little brown bat)   1
Pteropus_vampyrus_69_1   (Large flying fox)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1
Meleagris_gallopavo_69_2   (Turkey)   1
Gallus_gallus_69_2   (Chicken)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1
Ciona_intestinalis_69   (Vase tunicate)   1
Drosophila_melanogaster_69_5   (Fruit fly)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Homo_sapiens__(NCBI_version)   (Human)   1
TargetDB__(Targets) 1
STRING_v9.0.5_(STRING) 17
Uniprot_2018_03_genome 2190
NCBI_2017_08_genome 348

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