SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 50242,100895,100895,100895,100895,100895,100895,100895,100895,_gap_,57196,57196,100895,_gap_,82671,_gap_,49899,57196,49899,49899 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

50242 - TIMP-like
100895 - Kazal-type serine protease inhibitors
100895 - Kazal-type serine protease inhibitors
100895 - Kazal-type serine protease inhibitors
100895 - Kazal-type serine protease inhibitors
100895 - Kazal-type serine protease inhibitors
100895 - Kazal-type serine protease inhibitors
100895 - Kazal-type serine protease inhibitors
100895 - Kazal-type serine protease inhibitors
57196 - EGF/Laminin
57196 - EGF/Laminin
100895 - Kazal-type serine protease inhibitors
82671 - SEA domain
49899 - Concanavalin A-like lectins/glucanases
57196 - EGF/Laminin
49899 - Concanavalin A-like lectins/glucanases
49899 - Concanavalin A-like lectins/glucanases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Homo_sapiens_76_38   (Human)   1
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1
Canis_familiaris_76_3.1   (Dog)   1
Gallus_gallus_76_4   (Chicken)   2

Longest transcript per gene
Genome     Number
Homo_sapiens_69_37   (Human)   1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1
Canis_familiaris_69_3.1   (Dog)   1
Gallus_gallus_69_2   (Chicken)   1

Others
Genome     Number
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1
Homo_sapiens__(NCBI_version)   (Human)   1
STRING_v9.0.5_(STRING) 3
Uniprot_2018_03_genome 6612
NCBI_2017_08_genome 158

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