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Domain combinations for 52540,49879,_gap_,55961 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

52540 - P-loop containing nucleoside triphosphate hydrolases
49879 - SMAD/FHA domain
55961 - Bet v1-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gorilla_gorilla_76_3.1   (Western gorilla)   2
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1
Rattus_norvegicus_76_5.0   (Norway rat)   0
Mus_musculus_76_38   (House mouse)   0
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1
Cavia_porcellus_76_3   (Domestic guinea pig)   0
Ailuropoda_melanoleuca_76_1   (Giant panda)   0
Canis_familiaris_76_3.1   (Dog)   0
Myotis_lucifugus_76_2.0   (Little brown bat)   0
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   1
Gallus_gallus_76_4   (Chicken)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Anolis_carolinensis_76_2.0   (Green anole)   0

Longest transcript per gene
Genome     Number
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1
Rattus_norvegicus_69_3.4   (Norway rat)   0
Mus_musculus_69_38   (House mouse)   0
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1
Cavia_porcellus_69_3   (Domestic guinea pig)   0
Ailuropoda_melanoleuca_69_1   (Giant panda)   0
Myotis_lucifugus_69_2.0   (Little brown bat)   0
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1
Anolis_carolinensis_69_2.0   (Green anole)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 1
NCBI_2017_08_genome 6
Uniprot_2018_03_genome 80

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