SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 53720,53720,53720 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

53720 - ALDH-like
53720 - ALDH-like
53720 - ALDH-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Oryctolagus_cuniculus_76_2   (Rabbit)   1
Vicugna_pacos_76_1   (Alpaca)   1
Erinaceus_europaeus_76   (Western European hedgehog)   1
Procavia_capensis_76_1   (Cape rock hyrax)   1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1
Heliconius_melpomene_   (Postman butterfly)   0
Drosophila_suzukii 0
Pinus_taeda   (Loblolly pine)   1
Sorghum_bicolor_   (Sorghum)   0
Thecamonas_trahens_ATCC_50062_ 0

Longest transcript per gene
Genome     Number
Oryctolagus_cuniculus_69_2   (Rabbit)   1
Vicugna_pacos_69_1   (Alpaca)   1
Erinaceus_europaeus_69   (Western European hedgehog)   1
Procavia_capensis_69_1   (Cape rock hyrax)   1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1

Others
Genome     Number
Nicotiana_benthamiana_0.4.4_(Early_draft) 1
STRING_v9.0.5_(STRING) 2
NCBI_2017_08_genome 10
Uniprot_2018_03_genome 45

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