SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 75098 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

75098 - Monomethylamine methyltransferase MtmB

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Gorilla_gorilla_76_3.1   (Western gorilla)   0
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Crassostrea_gigas_22   (Pacific oyster)   0
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   0
Drosophila_willistoni_1.3 0
Tetranychus_urticae_   (Two-spotted spider mite)   0
Coprinopsis_cinerea_okayama7_130_v3 0
Galerina_marginata_v1.0 0
Stereum_hirsutum_FP-91666_SS1__v1.0 0
Heterobasidion_annosum_ 0
Punctularia_strigosozonata_v1.0 0
Podospora_anserina_ 0
Verticillium_dahliae_VdLs.17_ 0
Acremonium_alcalophilumv_1.0 0
Glomerella_graminicola_22 0
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 0
Kluyveromyces_waltii 0
Zygosaccharomyces_rouxii_ 0
Saccharomyces_bayanus_MIT 0
Theobroma_cacao_B97-61/B2_v1   (Cacao)   0
Thellungiella_halophila_v173 0
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   0
Carica_papaya_   (Papaya)   0
Fragaria_vesca_   (Wild strawberry)   0
Malus_domestica_v196   (Apple)   0
Prunus_persica_v139   (Peach)   0
Populus_trichocarpa_v156   (Black cottonwood)   0
Triticum_urartu_22 0
Triticum_aestivum_22   (Bread wheat)   0
Oryza_nivara_22 0
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   0
Oryza_sativa_v193   (Rice)   0
Panicum_virgatum_v202   (Switchgrass)   0
Zea_mays_subsp._mays_   (Maize)   0
Zea_mays_v181   (Maize)   0
Musa_balbisiana   (Balbis banana)   0
Amborella_trichopoda_22 0
Ostreococcus_lucimarinus_CCE9901_ 0
Bathycoccus_prasinos_ 0
Thecamonas_trahens_ATCC_50062_ 0
Bigelowiella_natans_CCMP2755_22 0
Cyanophora_paradoxa_ 0
Trypanosoma_brucei_gambiense_v4.1 0
Aureococcus_anophagefferens_ 0
Phaeodactylum_tricornutumCCAP_1055/1 0
Perkinsus_marinus_ATCC_50983_ 0
Paramecium_tetraurelia_ 0
Microcystis_aeruginosa_NIES-843 0
Olsenella_uli_DSM_7084 0
Streptomyces_griseus_subsp._griseus_NBRC_13350 0
Streptomyces_avermitilis_MA-4680 0
Saccharopolyspora_erythraea_NRRL_2338 0
Nocardioides_sp._JS614 0
Actinoplanes_sp._N902-109 0
Actinoplanes_sp._SE50/110 0
Actinoplanes_missouriensis_431 0
Nocardia_farcinica_IFM_10152 0
Mycobacterium_rhodesiae_NBB3 0
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 0
Roseiflexus_castenholzii_DSM_13941 0
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1
Ethanoligenens_harbinense_YUAN-3 0
Candidatus_Desulforudis_audaxviator_MP104C 0
Desulfitobacterium_hafniense_Y51 0
Desulfitobacterium_dehalogenans_ATCC_51507 0
Desulfotomaculum_acetoxidans_DSM_771 1
Eubacterium_eligens_ATCC_27750 0
Clostridium_sticklandii_DSM_519 0
Eubacterium_rectale_ATCC_33656 0
Alkaliphilus_metalliredigens_QYMF 0
Clostridium_perfringens_ATCC_13124 0
Thermosediminibacter_oceani_DSM_16646 0
Coprothermobacter_proteolyticus_DSM_5265 0
Carboxydothermus_hydrogenoformans_Z-2901 0
Acetohalobium_arabaticum_DSM_5501 1
Parabacteroides_distasonis_ATCC_8503 0
Tannerella_forsythia_ATCC_43037 0
Flavobacterium_columnare_ATCC_49512 0
Pirellula_staleyi_DSM_6068 0
Candidatus_Solibacter_usitatus_Ellin6076 0
Granulicella_tundricola_MP5ACTX9 0
Anaeromyxobacter_dehalogenans_2CP-1 0
Chromobacterium_violaceum_ATCC_12472 0
Burkholderia_rhizoxinica_HKI_454 0
Acidovorax_avenae_subsp._avenae_ATCC_19860 0
Achromobacter_xylosoxidans_A8 0
Hyphomonas_neptunium_ATCC_15444 0
Rhizobium_leguminosarum_bv._viciae_3841 0
Agrobacterium_tumefaciens_str._C58 0
Methylocystis_sp._SC2 0
Marinobacter_aquaeolei_VT8 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 0
Pseudomonas_entomophila_L48 0
Pseudomonas_syringae_pv._tomato_str._DC3000 0
Pseudomonas_protegens_Pf-5 0
Thermofilum_sp._1910b 1
Thermofilum_pendens_Hrk_5 1
Methanosalsum_zhilinae_DSM_4017 4
Methanohalobium_evestigatum_Z-7303 3
Methanosarcina_acetivorans_C2A 2
Methanosarcina_mazei_Go1 3
Methanosarcina_barkeri_str._Fusaro 2
Methanohalophilus_mahii_DSM_5219 1
Methanoplanus_petrolearius_DSM_11571 0
Thermoplasmatales_archaeon_BRNA1 2
Haloferax_mediterranei_ATCC_33500 0
Halorhabdus_utahensis_DSM_12940 0
Methanocaldococcus_sp._FS406-22 0

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Strains
Genome     Number
Histoplasma_capsulatum_H88 0
Batrachochytrium_dendrobatidis_JAM81_ 0
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   0
Chamaesiphon_minutus_PCC_6605 0
Streptomyces_collinus_Tu_365 0
Amycolatopsis_orientalis_HCCB10007 0
Actinoplanes_friuliensis_DSM_7358 0
Desulfitobacterium_hafniense_DCB-2 0
Clostridium_perfringens_str._13 0
Bacillus_cereus_AH187 0
Bacillus_cereus_NC7401 0
Geobacter_sp._M18 0
Burkholderia_pseudomallei_1026b 0
Burkholderia_pseudomallei_1710b 0
Octadecabacter_arcticus_238 0
Rhodobacter_sphaeroides_2.4.1 0
Rickettsia_bellii_RML369-C 0
Rhizobium_leguminosarum_bv._trifolii_WSM1325 0
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 0
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 0
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 0
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 0
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 0
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 0
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 0
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 0
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 0
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 0
Salmonella_enterica_serovar_Bovismorbificans_genomics 0
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 0
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 0
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 0
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 0
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 0
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 0
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 0
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 0
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 0
Pseudomonas_monteilii_SB3078 0
Pseudomonas_putida_H8234 0
Pseudomonas_putida_HB3267 0
Pseudomonas_putida_NBRC_14164 0
Pseudomonas_putida_S16 0
Pseudomonas_putida_GB-1 0
Pseudomonas_protegens_CHA0 0
Methanomethylovorans_hollandica_DSM_15978 3
Methanolobus_psychrophilus_R15 8
Methanosarcina_mazei_Tuc01 1
Candidatus_Methanomethylophilus_alvus_Mx1201 2

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Longest transcript per gene
Genome     Number
Gorilla_gorilla_69_3.1   (Western gorilla)   0
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   0

Others
Genome     Number
Malus_x_domestica_(Duplicate)   (Apple)   0
Ricinus_communis__(Early_assembly)   (Castor bean)   0
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
NCBI_plasmid_sequences_(Plasmids) 0
TargetDB__(Targets) 0
PDB_chains_(SCOP_1.75)_(PDB) 1
Protein_Data_Bank_(all_PDB_sequenc) 5
STRING_v9.0.5_(STRING) 8
NCBI_viral_sequences_(Viral) 0
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 17
NCBI_2017_08_genome 184
Uniprot_2018_03_genome 419

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