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Domain combinations for _gap_,103612,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

103612 - SBT domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Selaginella_moellendorffii_ 0
Pinus_taeda   (Loblolly pine)   9
Picea_abies   (Norway spruce)   6
Eucalyptus_grandis_v201   (Rose gum)   17
Theobroma_cacao_B97-61/B2_v1   (Cacao)   11
Gossypium_raimondii_v221 47
Citrus_clementina_v165 24
Citrus_sinensis_v154   (Sweet orange)   44
Thellungiella_halophila_v173 14
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   21
Capsella_rubella_v183 14
Arabidopsis_lyrata_   (Lyrate rockcress)   10
Arabidopsis_thaliana_10   (Thale cress)   24
Carica_papaya_   (Papaya)   7
Medicago_truncatula_   (Barrel medic)   20
Phaseolus_vulgaris_v186   (French bean)   18
Glycine_max_v109   (Soybean)   34
Cucumis_sativus_v122   (Cucumber)   12
Fragaria_vesca_   (Wild strawberry)   11
Malus_domestica_v196   (Apple)   26
Prunus_persica_v139   (Peach)   11
Linum_usitatissimum_v200   (Flax)   20
Manihot_esculenta_v147   (Cassava)   15
Populus_trichocarpa_v156   (Black cottonwood)   22
Vitis_vinifera_   (Wine grape)   12
Mimulus_guttatus_v140   (Spotted monkey flower)   9
Solanum_lycopersicum_v.2.3   (Tomato)   8
Solanum_tuberosum_   (Potato)   17
Actinidia_chinensis_Hongyang_ 21
Aquilegia_coerulea_v195 18
Triticum_urartu_22 4
Triticum_aestivum_22   (Bread wheat)   11
Aegilops_tauschii_22 8
Brachypodium_distachyon_   (Stiff brome)   12
Oryza_barthii_22   (African wild rice)   13
Oryza_meridionalis_22 21
Oryza_glumaepatula_22 19
Oryza_glaberrima   (African rice)   14
Oryza_punctata_22 15
Oryza_nivara_22 24
Oryza_brachyantha_22   (Malo sina)   11
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   23
Oryza_sativa_v193   (Rice)   23
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   22
Panicum_virgatum_v202   (Switchgrass)   17
Setaria_italica_v164   (Foxtail millet)   18
Zea_mays_subsp._mays_   (Maize)   36
Zea_mays_v181   (Maize)   41
Sorghum_bicolor_   (Sorghum)   15
Musa_balbisiana   (Balbis banana)   31
Musa_acuminata_22   (Wild Malaysian banana)   45
Amborella_trichopoda_22 10
Physcomitrella_patens 9
Coccomyxa_subellipsoidea_sp._C-169_v2 2
Chlorella_variabilis_sp._NC64A_ 18
Chlorella_vulgaris_ 1
Volvox_carteri_f._nagariensis_ 3
Volvox_carteri_v199 5
Chlamydomonas_reinhardtii_4.0 4
Ostreococcus_lucimarinus_CCE9901_ 1
Bathycoccus_prasinos_ 3
Micromonas_sp._RCC299_ 6
Micromonas_pusilla_CCMP1545_v3.0 3

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   13
Hordeum_vulgare_22   (Domesticated barley)   17
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   12

Longest transcript per gene
Genome     Number
Arabidopsis_thaliana_10   (Thale cress)   12

Others
Genome     Number
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1
Lotus_japonicus__(Early_assembly) 3
Malus_x_domestica_(Duplicate)   (Apple)   26
Ricinus_communis__(Early_assembly)   (Castor bean)   11
Nicotiana_benthamiana_0.4.4_(Early_draft) 19
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   8
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   8
Phoenix_dactylifera__(Early_draft)   (Date palm)   0
STRING_v9.0.5_(STRING) 112
Uniprot_2018_03_genome 9765
NCBI_2017_08_genome 2322

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