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Domain combinations for _gap_,57196,56112 superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57196 - EGF/Laminin
56112 - Protein kinase-like (PK-like)

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Astyanax_mexicanus_76   (Mexican tetra)   1
Proterospongia_sp._ATCC_50818_ 0
Monosiga_brevicollis_ 0
Eucalyptus_grandis_v201   (Rose gum)   8
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1
Gossypium_raimondii_v221 2
Citrus_clementina_v165 2
Citrus_sinensis_v154   (Sweet orange)   1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1
Arabidopsis_lyrata_   (Lyrate rockcress)   1
Medicago_truncatula_   (Barrel medic)   2
Glycine_max_v109   (Soybean)   2
Prunus_persica_v139   (Peach)   2
Linum_usitatissimum_v200   (Flax)   0
Populus_trichocarpa_v156   (Black cottonwood)   7
Vitis_vinifera_   (Wine grape)   1
Mimulus_guttatus_v140   (Spotted monkey flower)   1
Solanum_lycopersicum_v.2.3   (Tomato)   1
Solanum_tuberosum_   (Potato)   4
Actinidia_chinensis_Hongyang_ 1
Aquilegia_coerulea_v195 5
Triticum_urartu_22 18
Triticum_aestivum_22   (Bread wheat)   53
Aegilops_tauschii_22 34
Brachypodium_distachyon_   (Stiff brome)   6
Oryza_barthii_22   (African wild rice)   17
Oryza_meridionalis_22 9
Oryza_glumaepatula_22 24
Oryza_glaberrima   (African rice)   7
Oryza_punctata_22 14
Oryza_nivara_22 17
Oryza_brachyantha_22   (Malo sina)   10
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   11
Oryza_sativa_v193   (Rice)   12
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   5
Panicum_virgatum_v202   (Switchgrass)   23
Setaria_italica_v164   (Foxtail millet)   18
Zea_mays_subsp._mays_   (Maize)   2
Zea_mays_v181   (Maize)   4
Sorghum_bicolor_   (Sorghum)   10
Musa_balbisiana   (Balbis banana)   6
Musa_acuminata_22   (Wild Malaysian banana)   13

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Strains
Genome     Number
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1
Hordeum_vulgare_22   (Domesticated barley)   6
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   11

Others
Genome     Number
Lotus_japonicus__(Early_assembly) 2
Ricinus_communis__(Early_assembly)   (Castor bean)   1
Nicotiana_benthamiana_0.4.4_(Early_draft) 0
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1
Phoenix_dactylifera__(Early_draft)   (Date palm)   2
NCBI_2017_08_genome 196
Uniprot_2018_03_genome 3390
STRING_v9.0.5_(STRING) 39

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