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Domain combinations for _gap_,57630,57196,57196,_gap_ superfamilies in groups of genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57630 - GLA-domain
57196 - EGF/Laminin
57196 - EGF/Laminin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


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Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all sequences containing the chosen domain combination (listed below) in that genome.

Complete genomes
Genome     Number
Pongo_abelii_76_2   (Sumatran orangutan)   1
Sus_scrofa_76_10.2   (Pig)   0
Tursiops_truncatus_76_1   (Bottlenose dolphin)   0
Echinops_telfairi_76   (Small Madagascar hedgehog)   0
Meleagris_gallopavo_76_2   (Turkey)   0
Anas_platyrhynchos_76_1.0   (Mallard)   0
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   0
Lepisosteus_oculatus_76   (Spotted gar)   0
Takifugu_rubripes_76_4   (Torafugu)   0
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   0
Poecilia_formosa_76   (Amazon molly)   0
Danio_rerio_76_9   (Zebrafish)   0

Strains
Genome     Number
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   0

Longest transcript per gene
Genome     Number
Pongo_abelii_69_2   (Sumatran orangutan)   1
Sus_scrofa_69_10.2   (Pig)   0
Tursiops_truncatus_69_1   (Bottlenose dolphin)   0
Echinops_telfairi_69   (Small Madagascar hedgehog)   0
Meleagris_gallopavo_69_2   (Turkey)   0
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   0
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   0
Danio_rerio_69_9   (Zebrafish)   0

Others
Genome     Number
STRING_v9.0.5_(STRING) 2
Uniprot_2018_03_genome 104
NCBI_2017_08_genome 7

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