SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for Chemosensory protein Csp2 superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Chemosensory protein Csp2 domain in that genome.

Complete genomes
Genome     Number   Proteins
Danaus_plexippus_OGS1.0   (Monarch butterfly)   35 32
Heliconius_melpomene_   (Postman butterfly)   35 35
Bombyx_mori_   (Domestic silkworm)   19 19
Nasonia_vitripennis_   (Jewel wasp)   10 10
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   13 13
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   12 12
Linepithema_humile_v1.1   (Argentine ant)   15 13
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   12 12
Solenopsis_invicta_v.2.2.3   (Red fire ant)   15 15
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   15 15
Atta_cephalotes_v1.1 15 15
Camponotus_floridanus_v3.3   (Florida carpenter ant)   12 12
Lucilia_cuprina   (Australian sheep blowfly)   5 4
Drosophila_grimshawi_1.3 4 4
Drosophila_willistoni_1.3 4 4
Drosophila_pseudoobscura_2.13 4 4
Drosophila_persimilis_1.3 5 5
Drosophila_suzukii 4 4
Drosophila_yakuba_1.3 4 4
Drosophila_simulans_1.3 4 4
Drosophila_sechellia_1.3 4 4
Drosophila_melanogaster_76_5   (Fruit fly)   4 4
Drosophila_erecta_1.3 4 4
Drosophila_ananassae_1.3 4 4
Drosophila_virilis_1.2 4 4
Drosophila_mojavensis_1.3 4 4
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   43 43
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   28 28
Anopheles_darlingi_22   (American malaria mosquito)   6 6
Anopheles_gambiae_49_3j   (African malaria mosquito)   8 8
Tribolium_castaneum_3.0   (Red flour beetle)   19 19
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   7 7
Acyrthosiphon_pisum_   (Pea aphid)   12 12
Rhodnius_prolixus_22 19 19
Daphnia_pulex_   (Common water flea)   3 3
Strigamia_maritima_22 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   4 4
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   12 12

Longest transcript per gene
Genome     Number   Proteins
Drosophila_melanogaster_69_5   (Fruit fly)   4 4

Others
Genome     Number   Proteins
Heliconius_numata__(Incomplete) 29 29
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 26 26
Protein_Data_Bank_(all_PDB_sequenc) 9 9
STRING_v9.0.5_(STRING) 150 150
NCBI_2017_08_genome 1343 1311
PDB_chains_(SCOP_1.75)_(PDB) 1 1
Uniprot_2018_03_genome 2429 2400
TargetDB__(Targets) 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]