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Domain combinations for NAC domain superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a NAC domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Dictyostelium_discoideum 1 1
Dictyostelium_purpureum_ 1 1
Selaginella_moellendorffii_ 40 40
Pinus_taeda   (Loblolly pine)   151 142
Picea_abies   (Norway spruce)   69 68
Eucalyptus_grandis_v201   (Rose gum)   205 205
Theobroma_cacao_B97-61/B2_v1   (Cacao)   116 115
Gossypium_raimondii_v221 267 266
Citrus_clementina_v165 159 159
Citrus_sinensis_v154   (Sweet orange)   147 145
Thellungiella_halophila_v173 123 122
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   210 205
Capsella_rubella_v183 125 119
Arabidopsis_lyrata_   (Lyrate rockcress)   130 123
Arabidopsis_thaliana_10   (Thale cress)   147 140
Carica_papaya_   (Papaya)   85 85
Medicago_truncatula_   (Barrel medic)   127 126
Phaseolus_vulgaris_v186   (French bean)   105 105
Glycine_max_v109   (Soybean)   192 192
Cucumis_sativus_v122   (Cucumber)   103 102
Fragaria_vesca_   (Wild strawberry)   140 136
Malus_domestica_v196   (Apple)   266 259
Prunus_persica_v139   (Peach)   116 115
Linum_usitatissimum_v200   (Flax)   194 193
Manihot_esculenta_v147   (Cassava)   132 132
Populus_trichocarpa_v156   (Black cottonwood)   184 184
Vitis_vinifera_   (Wine grape)   72 71
Mimulus_guttatus_v140   (Spotted monkey flower)   115 114
Solanum_lycopersicum_v.2.3   (Tomato)   102 102
Solanum_tuberosum_   (Potato)   144 143
Actinidia_chinensis_Hongyang_ 175 171
Aquilegia_coerulea_v195 86 86
Triticum_urartu_22 106 105
Triticum_aestivum_22   (Bread wheat)   258 256
Aegilops_tauschii_22 124 118
Brachypodium_distachyon_   (Stiff brome)   115 113
Oryza_barthii_22   (African wild rice)   151 148
Oryza_meridionalis_22 151 147
Oryza_glumaepatula_22 169 166
Oryza_glaberrima   (African rice)   115 114
Oryza_punctata_22 159 153
Oryza_nivara_22 181 177
Oryza_brachyantha_22   (Malo sina)   125 123
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   179 178
Oryza_sativa_v193   (Rice)   176 175
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   130 127
Panicum_virgatum_v202   (Switchgrass)   260 255
Setaria_italica_v164   (Foxtail millet)   153 149
Zea_mays_subsp._mays_   (Maize)   200 199
Zea_mays_v181   (Maize)   221 219
Sorghum_bicolor_   (Sorghum)   128 125
Musa_balbisiana   (Balbis banana)   189 184
Musa_acuminata_22   (Wild Malaysian banana)   174 172
Amborella_trichopoda_22 47 47
Physcomitrella_patens 32 32

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Strains
Genome     Number   Proteins
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   107 106
Hordeum_vulgare_22   (Domesticated barley)   152 152
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   177 174

Longest transcript per gene
Genome     Number   Proteins
Arabidopsis_thaliana_10   (Thale cress)   121 114

Others
Genome     Number   Proteins
Picea_sitchensis__(Incomplete)   (Sitka spruce)   7 7
Lotus_japonicus__(Early_assembly) 116 114
Malus_x_domestica_(Duplicate)   (Apple)   266 259
Ricinus_communis__(Early_assembly)   (Castor bean)   96 96
Nicotiana_benthamiana_0.4.4_(Early_draft) 228 222
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   101 101
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   102 102
Phoenix_dactylifera__(Early_draft)   (Date palm)   67 65
Protein_Data_Bank_(all_PDB_sequenc) 15 15
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 21 21
STRING_v9.0.5_(STRING) 1069 1047
TargetDB__(Targets) 40 39
NCBI_2017_08_genome 12235 12120
Uniprot_2018_03_genome 14877 14676
PDB_chains_(SCOP_1.75)_(PDB) 1 1

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