SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for Pollen allergen ole e 6 superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Pollen allergen ole e 6 domain in that genome.

Complete genomes
Genome     Number   Proteins
Eucalyptus_grandis_v201   (Rose gum)   2 2
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 2 2
Carica_papaya_   (Papaya)   2 2
Populus_trichocarpa_v156   (Black cottonwood)   4 4
Vitis_vinifera_   (Wine grape)   1 1
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   7 7
Solanum_tuberosum_   (Potato)   8 8
Actinidia_chinensis_Hongyang_ 4 4
Aquilegia_coerulea_v195 2 2

Strains
Genome     Number   Proteins
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1 1

Others
Genome     Number   Proteins
Ricinus_communis__(Early_assembly)   (Castor bean)   3 3
Nicotiana_benthamiana_0.4.4_(Early_draft) 6 6
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   6 6
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   7 7
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3 3
STRING_v9.0.5_(STRING) 4 4
PDB_chains_(SCOP_1.75)_(PDB) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 1 1
NCBI_2017_08_genome 67 67
Uniprot_2018_03_genome 100 100

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