SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for HP1531-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a HP1531-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Wolinella_succinogenes_DSM_1740 1 1
Helicobacter_cetorum_MIT_00-7128 1 1
Helicobacter_bizzozeronii_CIII-1 1 1
Helicobacter_hepaticus_ATCC_51449 1 1
Helicobacter_felis_ATCC_49179 1 1
Helicobacter_cinaedi_PAGU611 1 1
Helicobacter_acinonychis_str._Sheeba 1 1
Helicobacter_pylori_B38 1 1

Strains
Genome     Number   Proteins
Helicobacter_cetorum_MIT_99-5656 1 1
Helicobacter_pylori_BM012S 1 1
Helicobacter_pylori_BM012A 1 1
Helicobacter_pylori_SouthAfrica20 1 1
Helicobacter_pylori_UM298 1 1
Helicobacter_pylori_UM066 1 1
Helicobacter_pylori_UM037 1 1
Helicobacter_pylori_UM299 1 1
Helicobacter_pylori_UM032 1 1
Helicobacter_pylori_OK310 1 1
Helicobacter_pylori_OK113 1 1
Helicobacter_pylori_Rif2 1 1
Helicobacter_pylori_Rif1 1 1
Helicobacter_pylori_HUP-B14 1 1
Helicobacter_pylori_PeCan18 1 1
Helicobacter_pylori_Shi169 1 1
Helicobacter_pylori_Shi112 1 1
Helicobacter_pylori_Shi417 1 1
Helicobacter_pylori_XZ274 1 1
Helicobacter_pylori_Aklavik86 1 1
Helicobacter_pylori_Aklavik117 1 1
Helicobacter_pylori_SNT49 1 1
Helicobacter_pylori_Puno135 1 1
Helicobacter_pylori_Puno120 1 1
Helicobacter_pylori_ELS37 1 1
Helicobacter_pylori_Gambia94/24 1 1
Helicobacter_pylori_SouthAfrica7 1 1
Helicobacter_pylori_India7 1 1
Helicobacter_pylori_Lithuania75 1 1
Helicobacter_pylori_2017 1 1
Helicobacter_pylori_2018 1 1
Helicobacter_pylori_908 1 1
Helicobacter_pylori_F57 1 1
Helicobacter_pylori_F30 1 1
Helicobacter_pylori_F16 1 1
Helicobacter_pylori_Sat464 1 1
Helicobacter_pylori_Cuz20 1 1
Helicobacter_pylori_PeCan4 1 1
Helicobacter_pylori_SJM180 1 1
Helicobacter_pylori_B8 1 1
Helicobacter_pylori_52 1 1
Helicobacter_pylori_v225d 1 1
Helicobacter_pylori_83 1 1
Helicobacter_pylori_35A 1 1
Helicobacter_pylori_P12 1 1
Helicobacter_pylori_G27 1 1
Helicobacter_pylori_Shi470 1 1
Helicobacter_pylori_HPAG1 1 1
Helicobacter_pylori_51 1 1
Helicobacter_pylori_F32 1 1
Helicobacter_pylori_J99 1 1
Helicobacter_pylori_26695 1 1
Helicobacter_pylori_26695 1 1

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Others
Genome     Number   Proteins
PDB_chains_(SCOP_1.75)_(PDB) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 6 6
STRING_v9.0.5_(STRING) 10 10
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 18 18
Uniprot_2018_03_genome 284 284
NCBI_2017_08_genome 738 738
TargetDB__(Targets) 1 1

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