SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for TM0693-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a TM0693-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Odoribacter_splanchnicus_DSM_20712 1 1
Marinitoga_piezophila_KA3 1 1
Petrotoga_mobilis_SJ95 1 1
Fervidobacterium_pennivorans_DSM_9078 1 1
Fervidobacterium_nodosum_Rt17-B1 1 1
Thermosipho_melanesiensis_BI429 1 1
Thermosipho_africanus_TCF52B 1 1
Thermotoga_lettingae_TMO 1 1
Thermotoga_thermarum_DSM_5069 1 1
Thermotoga_sp._RQ2 1 1
Thermotoga_naphthophila_RKU-10 1 1
Thermotoga_petrophila_RKU-1 1 1
Thermotoga_neapolitana_DSM_4359 1 1
Thermotoga_maritima_MSB8 1 1
Methylomicrobium_alcaliphilum 1 1
Sulfolobus_acidocaldarius_DSM_639 1 1

Strains
Genome     Number   Proteins
Thermotoga_maritima_MSB8 1 1
Sulfolobus_acidocaldarius_Ron12/I 1 1
Sulfolobus_acidocaldarius_N8 1 1

Others
Genome     Number   Proteins
Protein_Data_Bank_(all_PDB_sequenc) 4 4
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 8 8
STRING_v9.0.5_(STRING) 11 11
TargetDB__(Targets) 11 11
Uniprot_2018_03_genome 79 79
NCBI_2017_08_genome 256 256
PDB_chains_(SCOP_1.75)_(PDB) 1 1

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