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Domain combinations for ROP protein superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a ROP protein domain in that genome.

Complete genomes
Genome     Number   Proteins
Adineta_vaga 1 1
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   1 1
Musa_acuminata_22   (Wild Malaysian banana)   1 1
Sodalis_glossinidius_str._'morsitans' 1 1
Erwinia_pyrifoliae_Ep1/96 2 2
Shigella_sonnei_Ss046 1 1
Citrobacter_koseri_ATCC_BAA-895 1 1

Strains
Genome     Number   Proteins
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   1 1
Yersinia_pestis_biovar_Microtus_str._91001 1 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1 1
Yersinia_pestis_Nepal516 2 2
Yersinia_pestis_Antiqua 2 2
Yersinia_pestis_CO92 1 1
Erwinia_pyrifoliae_DSM_12163 2 2
Shigella_sonnei_53G 1 1
Shigella_flexneri_2002017 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1 1
Klebsiella_pneumoniae_JM45 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 2 2
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1 1
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_JJ1886 1 1
Escherichia_coli_NA114 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_SMS-3-5 1 1
Escherichia_coli_SE11 2 2
Escherichia_coli_ETEC_H10407 1 1
Escherichia_coli_O55:H7_str._RM12579 2 2
Escherichia_coli_O26:H11_str._11368 2 2
Escherichia_coli_O111:H-_str._11128 1 1

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Others
Genome     Number   Proteins
Ricinus_communis__(Early_assembly)   (Castor bean)   1 1
NCBI_plasmid_sequences_(Plasmids) 103 103
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 117 111
Uniprot_2018_03_genome 523 523
NCBI_2017_08_genome 9457 9457
PDB_chains_(SCOP_1.75)_(PDB) 7 7
STRING_v9.0.5_(STRING) 17 17
Protein_Data_Bank_(all_PDB_sequenc) 41 37

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