SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for Scaffolding protein gpD of bacteriophage procapsid superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Scaffolding protein gpD of bacteriophage procapsid domain in that genome.

Complete genomes
Genome     Number   Proteins
Pinus_taeda   (Loblolly pine)   1 1

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 1 1
PDB_chains_(SCOP_1.75)_(PDB) 2 2
NCBI_viral_sequences_(Viral) 7 7
Protein_Data_Bank_(all_PDB_sequenc) 14 14
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 33 33
UniProt__viral_sequences_(Viral) 66 66
Uniprot_2018_03_genome 248 248
NCBI_2017_08_genome 803 803

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]