SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for Amine oxidase N-terminal region superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Amine oxidase N-terminal region domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   22 11
Pan_troglodytes_76_2.1.4   (Chimpanzee)   8 4
Gorilla_gorilla_76_3.1   (Western gorilla)   6 3
Pongo_abelii_76_2   (Sumatran orangutan)   8 4
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2 1
Papio_anubis_76   (Olive baboon)   8 4
Macaca_mulatta_76_1   (Rhesus monkey)   8 4
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   16 8
Otolemur_garnettii_76_3   (Small-eared galago)   8 4
Microcebus_murinus_76_1   (Gray mouse lemur)   2 1
Rattus_norvegicus_76_5.0   (Norway rat)   11 5
Mus_musculus_76_38   (House mouse)   22 11
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   6 3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   6 4
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   3 2
Cavia_porcellus_76_3   (Domestic guinea pig)   4 2
Oryctolagus_cuniculus_76_2   (Rabbit)   4 2
Ochotona_princeps_76   (American pika)   5 3
Tupaia_belangeri_76   (Northern tree shrew)   3 2
Sus_scrofa_76_10.2   (Pig)   6 3
Bos_taurus_76_3.1   (Cattle)   14 7
Ovis_aries_76_3.1   (Sheep)   9 5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   5 3
Mustela_putorius_furo_76_1.0   (Domestic ferret)   8 4
Ailuropoda_melanoleuca_76_1   (Giant panda)   6 3
Canis_familiaris_76_3.1   (Dog)   10 5
Felis_catus_76_6.2   (Domestic cat)   6 3
Equus_caballus_76_2   (Horse)   8 4
Myotis_lucifugus_76_2.0   (Little brown bat)   16 8
Pteropus_vampyrus_76_1   (Large flying fox)   6 3
Sorex_araneus_76_1   (European shrew)   6 3
Erinaceus_europaeus_76   (Western European hedgehog)   4 2
Procavia_capensis_76_1   (Cape rock hyrax)   6 3
Loxodonta_africana_76_3   (African savanna elephant)   4 2
Echinops_telfairi_76   (Small Madagascar hedgehog)   2 2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   11 5
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   2 1
Macropus_eugenii_76_1.0   (Tammar wallaby)   5 3
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   5 2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   4 2
Ornithorhynchus_anatinus_76_5   (Platypus)   3 2
Petromyzon_marinus_76_7.0   (Sea lamprey)   8 4
Meleagris_gallopavo_76_2   (Turkey)   4 2
Gallus_gallus_76_4   (Chicken)   2 1
Anas_platyrhynchos_76_1.0   (Mallard)   4 2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2 1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2 1
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   5 2
Anolis_carolinensis_76_2.0   (Green anole)   4 2
Xenopus_laevis_   (African clawed frog)   6 3
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   6 3
Latimeria_chalumnae_76_1   (Coelacanth)   6 3
Lepisosteus_oculatus_76   (Spotted gar)   4 2
Gadus_morhua_76_1   (Atlantic cod)   4 2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   4 2
Takifugu_rubripes_76_4   (Torafugu)   6 3
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   4 2
Oryzias_latipes_76_1   (Japanese medaka)   6 3
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   4 2
Poecilia_formosa_76   (Amazon molly)   4 2
Oreochromis_niloticus_76_1.0   (Nile tilapia)   6 3
Astyanax_mexicanus_76   (Mexican tetra)   4 2
Danio_rerio_76_9   (Zebrafish)   4 2
Adineta_vaga 8 4
Octopus_bimaculoides_280 6 3
Crassostrea_gigas_22   (Pacific oyster)   17 10
Lottia_gigantea_   (Owl limpet)   16 8
Caenorhabditis_elegans_76_235   (Roundworm)   1 1
Hymenolepis_microstoma_ 1 1
Echinococcus_multilocularis_ 1 1
Schistosoma_mansoni_ 1 1
Acropora_digitifera_v1.0 6 4
Nematostella_vectensis_1.0   (Starlet sea anemone)   6 3
Capsaspora_owczarzaki_ATCC_30864_ 4 2
Phycomyces_blakesleeanus_ 2 1
Rhizopus_oryzae_RA_99-880_ 3 2
Mucor_circinelloides_ 2 1
Rhizomucor_miehei_CAU432_ 2 1
Sporisorium_reilianum_22 4 2
Ustilago_maydis_ 4 2
Mixia_osmundae_IAM_14324_v1.0 4 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 2 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 3 2
Sporobolomyces_roseus_IAM_13481_ 4 2
Microbotryum_violaceum_22 2 1
Wallemia_sebi_v1.0 6 3
Sphaerobolus_stellatus_v1.0 5 3
Piloderma_croceum_F_1598_v1.0 6 3
Serpula_lacrymans_var._lacrymans_S7.9_ 4 2
Coniophora_puteana 4 2
Hydnomerulius_pinastri_v2.0 4 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 4 2
Pisolithus_microcarpus_441_v1.0 6 3
Pisolithus_tinctorius_Marx_270_v1.0 4 2
Scleroderma_citrinum_Foug_A_v1.0 2 1
Coprinopsis_cinerea_okayama7_130_v3 10 5
Pleurotus_ostreatus_   (Oyster mushroom)   6 3
Amanita_thiersii_Skay4041_v1.0 3 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2 1
Galerina_marginata_v1.0 4 2
Hebeloma_cylindrosporum_h7_v2.0 4 2
Laccaria_bicolor_S238N-H82_ 6 4
Agaricus_bisporus_var._bisporus_ 4 2
Schizophyllum_commune_ 4 2
Stereum_hirsutum_FP-91666_SS1__v1.0 6 3
Heterobasidion_annosum_ 2 1
Gloeophyllum_trabeumv1.0 4 2
Punctularia_strigosozonata_v1.0 4 2
Sebacina_vermifera_MAFF_305830_v1.0 2 1
Fomitiporia_mediterranea_v1.0 2 1
Tulasnella_calospora_AL13/4D_v1.0 4 2
Postia_placenta_ 7 4
Wolfiporia_cocos_MD-104_SS10__v1.0 4 2
Fomitopsis_pinicolav1.0 4 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 4 2
Phanerochaete_chrysosporium_RP-78_2.1 4 2
Dichomitus_squalens 4 2
Trametes_versicolor_v1.0 4 2
Tremella_mesenterica_   (Witches' butter)   2 1
Daldinia_eschscholzii_EC12_v1.0 6 3
Apiospora_montagnei_NRRL_25634_v1.0 16 8
Magnaporthe_poae_ATCC_64411_22 11 6
Magnaporthe_grisea_70-15_ 11 7
Podospora_anserina_ 8 4
Sporotrichum_thermophile_ATCC_42464_ 4 2
Thielavia_terrestris_NRRL_8126_ 4 2
Chaetomium_globosum_CBS_148.51_ 4 2
Neurospora_tetrasperma_ 4 2
Neurospora_discreta_FGSC_8579_ 4 2
Neurospora_crassa_OR74A_ 4 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   10 5
Verticillium_albo-atrum_VaMs.102_ 15 8
Verticillium_dahliae_VdLs.17_ 12 6
Acremonium_alcalophilumv_1.0 3 2
Glomerella_graminicola_22 12 7
Fusarium_graminearum_ 13 7
Nectria_haematococca_mpVI_ 28 14
Fusarium_oxysporum_f._sp._lycopersici_4286_ 23 12
Fusarium_verticillioides_7600_ 17 9
Trichoderma_asperellum_CBS_433.97_v1.0 5 3
Trichoderma_atroviride_ 6 3
Trichoderma_citrinoviride_v1.0 6 3
Trichoderma_reesei_1.2 4 2
Trichoderma_virens_Gv29-8_ 8 4
Trichoderma_longibrachiatum_ATCC_18648_v1.0 4 2
Trichoderma_harzianum_CBS_226.95_v1.0 8 4
Amorphotheca_resinae_v1.0   (Creosote fungus)   8 4
Botrytis_cinerea_B05.10_ 4 2
Sclerotinia_sclerotiorum_ 6 3
Didymella_exigua_CBS_183.55_v1.0 8 4
Leptosphaeria_maculans_22 5 3
Setosphaeria_turcica_v1.0 12 6
Cochliobolus_miyabeanus_ATCC_44560_v1.0 10 5
Cochliobolus_victoriae_FI3_v1.0 14 7
Cochliobolus_carbonum_26-R-13_v1.0 12 6
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   8 4
Alternaria_brassicicola_ 10 5
Cochliobolus_lunatus_m118_v2.0 12 6
Pyrenophora_teres_f._teres_22 8 4
Pyrenophora_tritici-repentis_ 6 3
Stagonospora_nodorum_ 14 7
Mycosphaerella_graminicola_IPO323_ 6 3
Zasmidium_cellare_ATCC_36951_v1.0 14 7
Dothistroma_septosporum 6 3
Septoria_musiva_v1.0 4 2
Mycosphaerella_fijiensis_CIRAD86_ 6 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 8 4
Paracoccidioides_brasiliensis_Pb18_ 5 3
Coccidioides_posadasii_RMSCC_3488_ 12 6
Coccidioides_immitis_RS_ 12 6
Ajellomyces_dermatitidis_SLH14081_ 10 5
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 7 4
Microsporum_canis_CBS_113480_ 2 1
Trichophyton_equinum_CBS_127.97_ 4 2
Trichophyton_verrucosum_HKI_0517_ 4 2
Arthroderma_benhamiae_CBS_112371_ 4 2
Trichophyton_tonsurans_CBS_112818_ 4 2
Trichophyton_rubrum_CBS_118892_ 4 2
Uncinocarpus_reesii_1704_ 12 6
Aspergillus_zonatus_v1.0 12 6
Penicillium_chrysogenum_Wisconsin_54-1255_ 12 6
Penicillium_chrysogenum_v1.0 12 6
Aspergillus_acidus_v1.0 16 8
Aspergillus_fumigatus_Af293 13 7
Aspergillus_brasiliensis_v1.0 14 7
Aspergillus_nidulans_FGSC_A4_ 12 6
Aspergillus_sydowii_v1.0 12 6
Aspergillus_versicolor_v1.0 18 9
Aspergillus_glaucus 11 6
Aspergillus_carbonarius_ITEM_5010_ 10 5
Neosartorya_fischeri_NRRL_181_ 12 6
Aspergillus_terreus_NIH2624_ 12 6
Aspergillus_tubingensis_v1.0 18 9
Aspergillus_wentii_v1.0 13 7
Aspergillus_oryzae_RIB40_ 14 7
Aspergillus_niger_22 12 6
Aspergillus_niger_ATCC_1015_ 5 3
Aspergillus_flavus_NRRL3357_ 16 8
Aspergillus_clavatus_NRRL_1_ 8 4
Penicillium_marneffei_ATCC_18224_ 14 7
Tuber_melanosporum_Mel28_22 4 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   6 3
Hansenula_polymorpha_v2.0 6 2
Dekkera_bruxellensis_CBS_2499_v2.0 2 1
Pichia_membranifaciensv1.0 4 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 4 2
Candida_dubliniensis_CD36_ 4 2
Candida_tropicalis_MYA-3404_ 4 2
Candida_parapsilosis_ 4 2
Candida_albicans_SC5314 5 3
Lodderomyces_elongisporus_NRRL_YB-4239_ 4 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 4 2
Pichia_stipitis_CBS_6054_ 4 2
Candida_guilliermondii_ATCC_6260_ 4 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3 2
Debaromyces_hansenii 4 2
Wickerhamomyces_anomalus 8 4
Pichia_pastoris_GS115_ 6 3
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 6 3
Candida_lusitaniae_ATCC_42720_ 4 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 4 2
Kluyveromyces_thermotolerans_CBS_6340 2 1
Lachancea_kluyveri_ 2 1
Kluyveromyces_waltii 2 1
Ashbya_gossypii_ATCC_10895_ 2 1
Zygosaccharomyces_rouxii_ 2 1
Kluyveromyces_lactis 2 1
Schizosaccharomyces_cryophilus_OY26_22 2 1
Schizosaccharomyces_octosporus_yFS286_ 2 1
Schizosaccharomyces_pombe   (Fission yeast)   4 2
Spizellomyces_punctatus_DAOM_BR117_ 2 1
Dictyostelium_discoideum 1 1
Selaginella_moellendorffii_ 7 4
Pinus_taeda   (Loblolly pine)   18 9
Picea_abies   (Norway spruce)   8 4
Eucalyptus_grandis_v201   (Rose gum)   21 11
Theobroma_cacao_B97-61/B2_v1   (Cacao)   18 9
Gossypium_raimondii_v221 54 27
Citrus_clementina_v165 18 9
Citrus_sinensis_v154   (Sweet orange)   30 16
Thellungiella_halophila_v173 12 6
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   11 6
Capsella_rubella_v183 14 7
Arabidopsis_lyrata_   (Lyrate rockcress)   18 9
Arabidopsis_thaliana_10   (Thale cress)   19 10
Carica_papaya_   (Papaya)   9 5
Medicago_truncatula_   (Barrel medic)   42 22
Phaseolus_vulgaris_v186   (French bean)   28 14
Glycine_max_v109   (Soybean)   32 17
Cucumis_sativus_v122   (Cucumber)   16 8
Fragaria_vesca_   (Wild strawberry)   18 9
Malus_domestica_v196   (Apple)   23 13
Prunus_persica_v139   (Peach)   11 6
Linum_usitatissimum_v200   (Flax)   26 14
Manihot_esculenta_v147   (Cassava)   20 10
Populus_trichocarpa_v156   (Black cottonwood)   20 10
Vitis_vinifera_   (Wine grape)   14 7
Mimulus_guttatus_v140   (Spotted monkey flower)   10 5
Solanum_lycopersicum_v.2.3   (Tomato)   16 8
Solanum_tuberosum_   (Potato)   27 14
Actinidia_chinensis_Hongyang_ 18 9
Aquilegia_coerulea_v195 22 11
Triticum_urartu_22 4 2
Triticum_aestivum_22   (Bread wheat)   14 10
Aegilops_tauschii_22 4 2
Brachypodium_distachyon_   (Stiff brome)   12 6
Oryza_barthii_22   (African wild rice)   14 9
Oryza_meridionalis_22 22 12
Oryza_glumaepatula_22 15 8
Oryza_glaberrima   (African rice)   11 6
Oryza_punctata_22 14 7
Oryza_nivara_22 18 10
Oryza_brachyantha_22   (Malo sina)   6 4
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   13 7
Oryza_sativa_v193   (Rice)   13 7
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   9 5
Panicum_virgatum_v202   (Switchgrass)   22 13
Setaria_italica_v164   (Foxtail millet)   8 4
Zea_mays_subsp._mays_   (Maize)   16 11
Zea_mays_v181   (Maize)   16 11
Sorghum_bicolor_   (Sorghum)   11 6
Musa_balbisiana   (Balbis banana)   16 8
Musa_acuminata_22   (Wild Malaysian banana)   16 8
Amborella_trichopoda_22 4 2
Physcomitrella_patens 9 5
Coccomyxa_subellipsoidea_sp._C-169_v2 8 4
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 4 2
Chlorella_vulgaris_ 8 4
Volvox_carteri_f._nagariensis_ 3 2
Volvox_carteri_v199 2 1
Chlamydomonas_reinhardtii_4.0 5 3
Bathycoccus_prasinos_ 2 1
Micromonas_sp._RCC299_ 2 1
Micromonas_pusilla_CCMP1545_v3.0 2 1
Cyanidioschyzon_merolae_strain_10D_22 6 3
Cyanidioschyzon_merolae 6 3
Porphyridium_purpureum_02_2012 2 1
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Ectocarpus_siliculosus 4 2
Aureococcus_anophagefferens_ 2 1
Pythium_iwayamai_DAOM_BR242034_22 2 1
Pythium_arrhenomanes_ATCC_12531_22 1 1
Pythium_ultimum_v1.7-2 1 1
Pythium_irregulare_DAOM_BR486_22 2 1
Pythium_vexans_DAOM_BR484_22 4 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   8 4
Phytophthora_sojae_1.1 13 7
Phytophthora_infestans_T30-4_ 2 1
Phytophthora_capsici_ 7 4
Fragilariopsis_cylindrus 2 2
Neospora_caninum 1 1
Toxoplasma_gondii_VEG 1 1
Toxoplasma_gondii_ME49 1 1
Toxoplasma_gondii_GT1 1 1
Symbiodinium_minutum_clade_B1_v1.2 9 5
Emiliania_huxleyi_CCMP1516_ 3 3
Synechococcus_sp._PCC_6312 2 1
Trichodesmium_erythraeum_IMS101 2 1
Gloeocapsa_sp._PCC_7428 2 1
Calothrix_sp._PCC_7507 2 1
Anabaena_variabilis_ATCC_29413 2 1
Nostoc_sp._PCC_7107 2 1
Nostoc_punctiforme_PCC_73102 2 1
Nostoc_sp._PCC_7120 2 1
Nostoc_sp._PCC_7524 2 1
Anabaena_sp._90 2 1
Conexibacter_woesei_DSM_14684 2 1
Nakamurella_multipartita_DSM_44233 2 1
Modestobacter_marinus 4 2
Blastococcus_saxobsidens_DD2 2 1
Geodermatophilus_obscurus_DSM_43160 4 2
Catenulispora_acidiphila_DSM_44928 2 1
Frankia_sp._EAN1pec 2 1
Streptomyces_bingchenggensis_BCW-1 2 1
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 3 2
Pseudonocardia_dioxanivorans_CB1190 4 2
Microlunatus_phosphovorus_NM-1 2 1
Gordonia_polyisoprenivorans_VH2 6 3
Rhodococcus_jostii_RHA1 8 4
Rhodococcus_opacus_B4 6 3
Nocardia_farcinica_IFM_10152 2 1
Mycobacterium_abscessus_ATCC_19977 2 1
Mycobacterium_sp._JLS 2 1
Mycobacterium_vanbaalenii_PYR-1 4 2
Mycobacterium_gilvum_PYR-GCK 4 2
Mycobacterium_chubuense_NBB4 2 1
Mycobacterium_marinum_M 2 1
Mycobacterium_smegmatis_str._MC2_155 4 2
Microbacterium_testaceum_StLB037 4 2
Xylanimonas_cellulosilytica_DSM_15894 2 1
Arthrobacter_chlorophenolicus_A6 2 1
Arthrobacter_aurescens_TC1 8 4
Arthrobacter_arilaitensis_Re117 2 1
Arthrobacter_sp._Rue61a 4 2
Arthrobacter_sp._FB24 2 1
Sphaerobacter_thermophilus_DSM_20745 2 1
Herpetosiphon_aurantiacus_DSM_785 1 1
Paenibacillus_sp._JDR-2 4 2
Bacillus_sp._1NLA3E 2 1
Candidatus_Solibacter_usitatus_Ellin6076 3 2
Terriglobus_saanensis_SP1PR4 2 1
Stigmatella_aurantiaca_DW4/3-1 2 1
Burkholderia_phytofirmans_PsJN 2 1
Ralstonia_solanacearum_CFBP2957 2 1
Herbaspirillum_seropedicae_SmR1 2 1
Pseudovibrio_sp._FO-BEG1 2 1
Tistrella_mobilis_KA081020-065 2 1
Rhizobium_leguminosarum_bv._viciae_3841 2 1
Agrobacterium_radiobacter_K84 2 1
Mesorhizobium_loti_MAFF303099 2 1
Hyphomicrobium_sp._MC1 2 1
Bradyrhizobium_sp._ORS_278 2 1
Legionella_pneumophila_str._Corby 2 1
Escherichia_blattae_DSM_4481 2 1
Enterobacteriaceae_bacterium_strain_FGI_57 2 1
Klebsiella_oxytoca_E718 2 1
Klebsiella_variicola_At-22 2 1
Klebsiella_pneumoniae_NTUH-K2044 2 1
Enterobacter_aerogenes_KCTC_2190 2 1
Escherichia_fergusonii_ATCC_35469 2 1
Enterobacter_asburiae_LF7a 2 1
Enterobacter_cloacae_subsp._dissolvens_SDM 2 1
Acinetobacter_oleivorans_DR1 2 1
Acinetobacter_calcoaceticus_PHEA-2 2 1
Acinetobacter_baumannii_ATCC_17978 2 1
Sulfolobus_solfataricus_P2 2 1
Sulfolobus_acidocaldarius_DSM_639 2 1
Halalkalicoccus_jeotgali_B3 4 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   8 4
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   2 2
Cryptococcus_neoformans_var._grubii_H99_ 2 1
Cryptococcus_neoformans_B-3501A_ 2 1
Cryptococcus_neoformans_JEC21_ 2 1
Paracoccidioides_brasiliensis_Pb01_ 5 3
Paracoccidioides_brasiliensis_Pb03_ 6 4
Coccidioides_posadasii_str._Silveira_ 12 6
Coccidioides_immitis_RMSCC_3703_ 9 5
Coccidioides_immitis_RMSCC_2394_ 12 6
Coccidioides_immitis_H538.4_ 10 5
Ajellomyces_dermatitidis_ER-3_ 10 5
Histoplasma_capsulatum_H143 7 4
Histoplasma_capsulatum_H88 8 4
Histoplasma_capsulatum_G186AR 8 4
Aspergillus_fumigatus_A1163_ 12 6
Candida_albicans_WO-1_ 4 2
Schizosaccharomyces_pombe_972h-_ 4 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   15 8
Hordeum_vulgare_22   (Domesticated barley)   12 7
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   16 9
Neospora_caninum_Nc-Liverpool_6.2 1 1
Chroococcidiopsis_thermalis_PCC_7203 2 1
Synechococcus_sp._JA-2-3B'a(2-13) 2 1
Synechococcus_sp._JA-3-3Ab 2 1
Cyanothece_sp._PCC_7425 2 1
Cylindrospermum_stagnale_PCC_7417 2 1
Anabaena_cylindrica_PCC_7122 2 1
Frankia_sp._EuI1c 2 1
Streptomyces_davawensis_JCM_4913 1 1
Streptomyces_collinus_Tu_365 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 3 2
Saccharothrix_espanaensis_DSM_44229 2 1
Amycolatopsis_orientalis_HCCB10007 2 1
Mycobacterium_abscessus_subsp._bolletii_50594 2 1
Mycobacterium_sp._KMS 2 1
Mycobacterium_sp._MCS 2 1
Mycobacterium_gilvum_Spyr1 4 2
Mycobacterium_smegmatis_str._MC2_155 4 2
Ralstonia_solanacearum_Po82 2 1
Acetobacter_pasteurianus_386B 2 1
Rhodopseudomonas_palustris_HaA2 2 1
Bradyrhizobium_sp._S23321 4 2
Bradyrhizobium_sp._BTAi1 2 1
Bradyrhizobium_japonicum_USDA_6 2 1
Legionella_pneumophila_str._Paris 2 1
Legionella_pneumophila_subsp._pneumophila_LPE509 2 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 2 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 2 1
Legionella_pneumophila_subsp._pneumophila 2 1
Legionella_pneumophila_subsp._pneumophila 2 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 2 1
Legionella_pneumophila_2300/99_Alcoy 2 1
Raoultella_ornithinolytica_B6 2 1
Klebsiella_oxytoca_KCTC_1686 2 1
Klebsiella_pneumoniae_CG43 2 1
Klebsiella_pneumoniae_KCTC_2242 2 1
Klebsiella_pneumoniae_342 2 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 2 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 2 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 2 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 2 1
Enterobacter_aerogenes_EA1509E 2 1
Escherichia_coli_E24377A 2 1
Escherichia_coli_LY180 2 1
Escherichia_coli_APEC_O78 2 1
Escherichia_coli_O104:H4_str._2009EL-2050 2 1
Escherichia_coli_O104:H4_str._2009EL-2071 2 1
Escherichia_coli_O104:H4_str._2011C-3493 2 1
Escherichia_coli_P12b 2 1
Escherichia_coli_UMNK88 2 1
Escherichia_coli_KO11FL 2 1
Escherichia_coli_KO11FL 2 1
Escherichia_coli_55989 2 1
Escherichia_coli_IAI1 2 1
Escherichia_coli_W 2 1
Escherichia_coli_W 2 1
Escherichia_coli_DH1 2 1
Escherichia_coli_DH1 2 1
Escherichia_coli_ATCC_8739 2 1
Escherichia_coli_SE11 2 1
Escherichia_coli_O103:H2_str._12009 2 1
Escherichia_coli_HS 2 1
Escherichia_coli_ETEC_H10407 2 1
Escherichia_coli_O26:H11_str._11368 2 1
Escherichia_coli_O111:H-_str._11128 2 1
Escherichia_coli_BW2952 2 1
Escherichia_coli_str._K-12_substr._MG1655 2 1
Escherichia_coli_str._K-12_substr._W3110 2 1
Escherichia_coli_str._K-12_substr._DH10B 2 1
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_SCF1 2 1
Enterobacter_cloacae_EcWSU1 2 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 2 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 2 1
Pseudomonas_putida_ND6 2 1
Acinetobacter_genomosp._13TU__RUH2624 2 1
Acinetobacter_sp.__SH024 2 1
Acinetobacter_calcoaceticus_ruh2202 2 1
Acinetobacter_baumannii_ZW85-1 2 1
Acinetobacter_baumannii_TYTH-1 2 1
Acinetobacter_baumannii_BJAB0868 2 1
Acinetobacter_baumannii_BJAB0715 2 1
Acinetobacter_baumannii_BJAB07104 2 1
Acinetobacter_baumannii_TCDC-AB0715 2 1
Acinetobacter_baumannii_D1279779 2 1
Acinetobacter_baumannii_MDR-TJ 2 1
Acinetobacter_baumannii_1656-2 2 1
Acinetobacter_baumannii__ATCC_19606 2 1
Acinetobacter_baumannii_AB307-0294 2 1
Acinetobacter_baumannii_AYE 2 1
Acinetobacter_baumannii_MDR-ZJ06 2 1
Acinetobacter_baumannii_AB0057 2 1
Acinetobacter_baumannii_ACICU 2 1
Sulfolobus_islandicus_HVE10/4 2 1
Sulfolobus_islandicus_L.S.2.15 2 1
Sulfolobus_islandicus_L.D.8.5 2 1
Sulfolobus_solfataricus_98/2 2 1
Sulfolobus_acidocaldarius_SUSAZ 2 1
Sulfolobus_acidocaldarius_Ron12/I 2 1
Sulfolobus_acidocaldarius_N8 2 1
Natronococcus_occultus_SP4 6 3
Natronomonas_moolapensis_8.8.11 2 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   6 3
Pan_troglodytes_69_2.1.4   (Chimpanzee)   8 4
Gorilla_gorilla_69_3.1   (Western gorilla)   6 3
Pongo_abelii_69_2   (Sumatran orangutan)   8 4
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   4 2
Macaca_mulatta_69_1   (Rhesus monkey)   6 3
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   4 2
Otolemur_garnettii_69_3   (Small-eared galago)   8 4
Microcebus_murinus_69_1   (Gray mouse lemur)   2 1
Rattus_norvegicus_69_3.4   (Norway rat)   11 5
Mus_musculus_69_38   (House mouse)   12 6
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   6 3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   6 4
Cavia_porcellus_69_3   (Domestic guinea pig)   4 2
Oryctolagus_cuniculus_69_2   (Rabbit)   8 4
Ochotona_princeps_69   (American pika)   5 3
Tupaia_belangeri_69   (Northern tree shrew)   3 2
Sus_scrofa_69_10.2   (Pig)   6 3
Bos_taurus_69_3.1   (Cattle)   12 6
Tursiops_truncatus_69_1   (Bottlenose dolphin)   5 3
Mustela_putorius_furo_69_1.0   (Domestic ferret)   8 4
Ailuropoda_melanoleuca_69_1   (Giant panda)   6 3
Canis_familiaris_69_3.1   (Dog)   8 4
Felis_catus_69   (Domestic cat)   4 3
Equus_caballus_69_2   (Horse)   8 4
Myotis_lucifugus_69_2.0   (Little brown bat)   16 8
Pteropus_vampyrus_69_1   (Large flying fox)   6 3
Sorex_araneus_69_1   (European shrew)   6 3
Erinaceus_europaeus_69   (Western European hedgehog)   4 2
Procavia_capensis_69_1   (Cape rock hyrax)   6 3
Loxodonta_africana_69_3   (African savanna elephant)   4 2
Echinops_telfairi_69   (Small Madagascar hedgehog)   2 2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   2 1
Macropus_eugenii_69_1.0   (Tammar wallaby)   5 3
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   5 2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   4 2
Ornithorhynchus_anatinus_69_5   (Platypus)   3 2
Petromyzon_marinus_69_7.0   (Sea lamprey)   4 2
Meleagris_gallopavo_69_2   (Turkey)   4 2
Gallus_gallus_69_2   (Chicken)   3 1
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2 1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   3 1
Anolis_carolinensis_69_2.0   (Green anole)   4 2
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   6 3
Latimeria_chalumnae_69_1   (Coelacanth)   6 3
Gadus_morhua_69_1   (Atlantic cod)   4 2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   4 2
Takifugu_rubripes_69_4   (Torafugu)   4 2
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   4 2
Oryzias_latipes_69_1   (Japanese medaka)   4 2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   4 2
Oreochromis_niloticus_69_1.0   (Nile tilapia)   4 2
Danio_rerio_69_9   (Zebrafish)   4 2
Caenorhabditis_elegans_69_215   (Roundworm)   1 1
Arabidopsis_thaliana_10   (Thale cress)   19 10

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   18 9
Homo_sapiens__(NCBI_version)   (Human)   8 4
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   12 6
Moniliophthora_perniciosa_FA553__(Genome_survey) 4 3
Lotus_japonicus__(Early_assembly) 11 8
Malus_x_domestica_(Duplicate)   (Apple)   23 13
Ricinus_communis__(Early_assembly)   (Castor bean)   16 8
Nicotiana_benthamiana_0.4.4_(Early_draft) 25 16
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   16 8
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   16 8
Phoenix_dactylifera__(Early_draft)   (Date palm)   1 1
NCBI_plasmid_sequences_(Plasmids) 18 9
PDB_chains_(SCOP_1.75)_(PDB) 40 20
Protozoadb_2010_08_(Protozoadb) 6 6
Protein_Data_Bank_(all_PDB_sequenc) 508 254
STRING_v9.0.5_(STRING) 712 371
TargetDB__(Targets) 1 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1234 1234
Uniprot_2018_03_genome 12866 6702
NCBI_2017_08_genome 34360 17413

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]