SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for CytB endotoxin-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a CytB endotoxin-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Schizophyllum_commune_ 1 1
Gloeophyllum_trabeumv1.0 5 5
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Fusarium_graminearum_ 1 1
Clostridium_kluyveri_DSM_555 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Dickeya_dadantii_Ech703 4 4
Dickeya_zeae_Ech1591 4 4

Strains
Genome     Number   Proteins
Streptomyces_venezuelae_ATCC_10712 1 1
Clostridium_kluyveri_NBRC_12016 1 1
Bacillus_thuringiensis_HD-789 3 3
Bacillus_thuringiensis_MC28 2 2
Dickeya_dadantii_3937 4 4

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 8 8
PDB_chains_(SCOP_1.75)_(PDB) 3 3
STRING_v9.0.5_(STRING) 12 12
Protein_Data_Bank_(all_PDB_sequenc) 17 17
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 46 46
Uniprot_2018_03_genome 327 321
NCBI_2017_08_genome 336 335
TargetDB__(Targets) 1 1

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