SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for gp120 core superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a gp120 core domain in that genome.

Others
Genome     Number   Proteins
PDB_chains_(SCOP_1.75)_(PDB) 14 14
Protein_Data_Bank_(all_PDB_sequenc) 558 427
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 905 739
UniProt__viral_sequences_(Viral) 124778 106972
Uniprot_2018_03_genome 294299 229130
TargetDB__(Targets) 1 1
NCBI_viral_sequences_(Viral) 4 4
NCBI_2017_08_genome 8 7

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