SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for Apical membrane antigen 1 superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Apical membrane antigen 1 domain in that genome.

Complete genomes
Genome     Number   Proteins
Plasmodium_falciparum_3D7_ 1 1
Plasmodium_vivax_SaI-1_7.0 1 1
Plasmodium_knowlesi_strain_H_ 1 1
Plasmodium_yoelii_ssp._yoelii_1_ 1 1
Plasmodium_chabaudi_ 1 1
Plasmodium_berghei_ANKA_ 1 1

Strains
Genome     Number   Proteins
Plasmodium_falciparum_HB3_ 1 1
Plasmodium_falciparum_Dd2_ 1 1

Others
Genome     Number   Proteins
PDB_chains_(SCOP_1.75)_(PDB) 3 3
STRING_v9.0.5_(STRING) 4 4
Protein_Data_Bank_(all_PDB_sequenc) 6 6
Protozoadb_2010_08_(Protozoadb) 9 9
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 9 9
NCBI_2017_08_genome 13 13
Uniprot_2018_03_genome 1895 1895

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