ENSBTAP00000053594 from Bos taurus 76

For a sequence (see Protein sequence) in target, dcGO predictor has the following procedures to predict the ontology terms of the target:

First, obtain Domain architecture and its residual domains and supra-domains from the SUPERFAMILY database.

Then, use the domain-centric annotations to predict the ontology terms of the target:

If a target contained a domain/supra-domain, then all ontology terms associated to that domain/supra-domain are transferred to the target (together with hypergeometric score, h-score);
When a target-to-term transfer is supported by one or more residential domains/supra-domains, sum up h-scores to calculate predictive score (p-score);
The p-score is then rescaled to the range of 0-1. For each namespace (e.g., three sub-ontologies for GO), p-score=(SUM-MIN)/(MAX-MIN), where SUM is the sum of all h-scores to support a term transferred to the target, MIN and MAX are respectively the minimum and maximum of SUM over a whole list of predicted terms for the target;

Finally, the predictive score being rescaled is used to rank the predictions. The higher value of the p-score indicates the more evident the prediction is. In the dcGO, each ontology has a slim version on its own, containing ontological terms at four levels of increasing granularity (that is, being highly general, general, specific, and highly specific). Listed in the table are the top 5 predictions for each specificity and for each namespace. In addition to those restricted by the term specificity, i.e., Export prediction (slim version), the full list of predictions are also provided for the download, i.e., Export prediction (full version).

MGNAPSHSSEDEAAAAGGEGWGPHQDWAADSGTTPGQGPAAPALPPAAALLEPARLREAA AALRPTPPCESLVSRHHGALLRWLEERLGRGEESVTLEQFGELLEARGAGFSGERFEEAF AQFDAEGDGTVDAENMLEALKNSSGANLQGELSHIIRQLQACSLVPGFIDIFSESKEGLD VHAAMILRFLHRNRLSSTVIPYPMLDHCNNMSTMRASVLRESLDQLVQKEKESPGDLTRS PEMDKLKSVAKCYAYIETSSNPADIDKMTNGETSSYWQSDGSARSHWIRLKMKPDVVLRH LSIAVAATDQSYMPQQVTVAVGRTASDLQEVRDVHIPSNVTGYVTLLENANISQLYVQIN IKRCLSDGCDTRIHGLRAVGFQRVKKSGVSVSDASAIWYWSLLTSLVTASMETNPAFVQT VLRNTQKALQHMPPLSLSPGSTDFSTFLSPNVLEEVDSFLIRITSCRSTPEVELTLLAFA LARGSVAKVLSSLCTVTDHLDTHYDASSLISSMASVRQNLLLKYGKPLQLTLQACDVKGK EEKSGPENLLAEPWTRDGFLTETGKTRASTIFSTGTESAFQVTQIRIMVRRGGIGAQCGL VFAYNSSSDKFHAEEHFKRFEKYDKWKLQEFRQFVKSRIGCSSDILGEDDPIGWFELEEE WDEADVKLQQCRVAKYLMVKFLCTRQESAERLGVQGLSISGYLRPARAEAEQSIICAHCR KSTEESVCGATLLLKTLQFIQQLAHDLVQQKESGLKYKSFLDFAGLDLQIFWNFYSKLKQ NPREECICAQTLLLQLLQSCFSVLQGDAPAAAEDAKAPSPRPRPVEAAKELYAHLCSVVD RLDGDSVPMEILKQEVRNTLLNGAAIFFPDRLTRRNHLFTMMNVTEQEHKQSMQLTFRSL CTYFSDKDPGGLLLLPEKGDLADMDISEVLAVMNTLLSVAARECELLMVDGAQREVGSVL SSLFWSVQGSLLSWCYLQLKSTDSGAKDLAADLTDRYVGQFLAHVRVILESLLSQYSGKT IVEKLCNSVFSMAARQLVIFLLDFCTLDISHCTLLREFSALTELLKELCSDPEGGVNKLD VETWQQERPVVLHTWTKESAHNYENNCHEVSVFVSPGATYFEVEFDERCETEKRYDYLEF TDARGGKTRYDTKVGTDKWPKKVTFKAGPRLQFLFHSDSSNNEWGYKFTVTAYGLPDVAV SWGLDLQLLVSRLMGRLASQCMALKSVHQLGSNMAVPQAKMALVLNSPLWKPVFRHQIHP ELGLEASWPTHPPQDNKEVKNIPDDHCHQFLLDFAQSDPAQNFCGPYSELFKGFIQACRK QAPKTDIVAGSTIDQAVNATFAALVYRTPDLYEKLQKYVNSGGKTALSEEFAQVYSLADG IRIWMLEMKQKSLMNLGSEAEEQRDPEAAEANPESLAKECYQKSLLLLKFLPTGGGSKES CDRSVAVDDTDHLQPLDKRQRTSSVVEEHFQASASPTEAAPPTAGDRSPGPDMQPTLPPS SGAPALEVSSVPAEEPSSPSTPTRRPPFTRGRLRLLSFRSMEEARPAPTVKEKYPVLKDL MDFIKDQSLSHESVVKVLSLRKAQAWSILEVLRIIQCCTESLGQPHCFHPPYILFLLELL TCQKEFTNYFGHLEGCGADLHKEIRDTYYQFVLFLVKAVKGFNSKNDRSLLPALSCIQTA LLHLLDMGWEPSDLTFFVDIQLPDLLMKMSQENISAHDSVISQWSEEDELADAKQNSEWM DECQDGMFEAWYEKIAQEDPEKQRKMHMFIARYCDLLNVDISCDGCDEIAPWHRYRCLQC SDMDLCKTCFLGGVKPEGHGDDHEMVNMEFTCDHCQGLIIGRRMHCNVCDDFDLCYGCYA AKKYSYGHLPTHSITAHPMVTIRISDRQRLIQPYIHNYSWLLFAALALYSAHLASAEDVD GEKLDPQVRSSAATLRSRCLQLVGDCLMKAHQGKGLKALALLGVLPDGGSPLENQALPVT APTQTSEEQPEKKAVQAAAEPAPTGPGKRDGPKEVRPLDCKQRSKASEGVSLRKDPSCPP QISDSPADACTPTGLPDAENSEASSQKPIEEKAVIPSPEQVFAECSQKRILGLLAAMLPP LNSDPTVPLIDLEHVLPLMFQVVISNAGHLNETYHLTLGLLGQLIIRLLPAEVDAAVTKV LSAKHNLFAAGDSSVVPDGWKTTHLLFSLGAVCLDSRVGLDWACSMAEILRSLNSAPLWR DVVATFTDHCIKQLPFQLKHTNIFTLLVLVGFPQVLCVGTRCVYMDNANEPHNVIILKHF TEKNRAVIVDVKTRKRKTVKDYQLVQKGGGQEGSDSQAQLSQYSQHFAFIASHLLQTSMD SHCPEAVEATWVLSLALKGLYKTLKVHGFEETHATFLQTDLLKLLVKKCSKGTGFSKTWL LRDLEILSIMLYSSKKEINTLAEHGELELDERGDQEEEVERSVSSPGDQEQKKLDPLESL DEPTRICFLMAHDALNAPLHILRAIYELQMKRTDSFFLEVQKRFDGDELTTDERIRTLAQ RWQPSRSLRLDEQSAKAVDTDMIILPCLSRPVRCEQATVESNPVTQKLISSTESELQQSY AKQRRSKSAALLHKELNCKSKRAVREYLFRVNEATAVLYARHVLASLLAEWPGHVPVSED ILELSGPAHMTYILDMFMQLEDRHQWEKILQKVLQGCRESMLGTMALAACQFMEEPGMEV QVRESKHPYNNNTNFEDKVHIPGAIYLSIKFDPQCNTEEGCDELAMSSSSDFQQDRHNFS GSQQKWKDFELPGDTLYYRFTSDMSNTEWGYRFTVTAGHLGRFQTGFEILKQMLSEERVV PYLPLAKIWEWLVGVACRQTGHQRLKAIHLLLRIVRCCTHSDLCDLTLLKPLWQLFTQME YSLFEDVTQAGILLPLHRALTELFFVTENRAQELGLLQDYLLALTTDDHLLRCAAQALQN IAAISLAINYPNKATRLWNVEC

LINKOUT

ENSBTAP00000053594 (Bos taurus 76_3.1)

Protein sequence

Domain architecture