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Domain assignment for ENSLOCP00000010160 from Lepisosteus oculatus 76

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSLOCP00000010160
Domain Number 1 Region: 343-459
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.89e-28
Family Reverse transcriptase 0.0026
Further Details:      
 
Domain Number 2 Region: 218-250
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000476
Family Retrovirus zinc finger-like domains 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSLOCP00000010160   Gene: ENSLOCG00000008366   Transcript: ENSLOCT00000010172
Sequence length 460
Comment pep:novel chromosome:LepOcu1:LG9:17942079:17943725:1 gene:ENSLOCG00000008366 transcript:ENSLOCT00000010172 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RSFAYAQLSPPLPLNLGDPHLYTEYKIWIESYRFFKIASRSTEPPDAVRRATLLHCIWAS
VQQIFANLPGEKGTYEQTVAALVTYFTRRRNVVLEWHKFRQTQSQDESVDAFVNALRELA
KSCDFGVLEADMLRDQLKCAHKRLCDKLLQEEGLTLERALTVARIHEAAQAESRMLSDHS
DKARVMFTSQETLNGALAQTLQTKAEQQDAVKYGLTTHKADECRARTAKCLHCKKTGHYA
RVCRKKDGSHQEKKLNTNKEGTKLRVVQEPDSDKNGDRYMCWLLQGTAEMKCTVEALLGK
TCFDLKILNVGDTVNAVDQSSERFKWFAQEYESLFKGLGQIKVYSHKVTVDEKVSPVTQS
LRRVPYQMIEAVNQGLDKMLDDGIIEDVNKGAEWISNILIIPKKDTKDVRLCVDLREVNK
AVIRERHPVPMVDRLLQAVQGSKVFAKLDAQKGFWQVELA
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Identical sequences W5MP51
ENSLOCP00000010160

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