SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428297648|ref|YP_007135954.1| from Calothrix parietina Calothrix sp. PCC 6303

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428297648|ref|YP_007135954.1|
Domain Number 1 Region: 356-563
Classification Level Classification E-value
Superfamily TPR-like 7.21e-35
Family Tetratricopeptide repeat (TPR) 0.01
Further Details:      
 
Domain Number 2 Region: 231-352
Classification Level Classification E-value
Superfamily TPR-like 4.74e-20
Family Tetratricopeptide repeat (TPR) 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|428297648|ref|YP_007135954.1|
Sequence length 568
Comment hypothetical protein Cal6303_0917 [Calothrix sp. PCC 6303]
Sequence
MSSSNKPSKQPSNHNSSENQAEIGKFIATNQDEFAELVTFIDFAEKFTLGFIEINFPPDI
NLLIAGLQQNSQCQEIQFVILDFPEKNLRFLRDELVRQLAEITKESNKKLVLLIRNLEKS
IGVFGDYPPILQDLNFVRDSYRQTVPHPLLFILPDYAISRLAKFAPDFWAWKSGLFRFKT
TELTRDRAIASTLDADTNIARLPTPEQQERIDLLHSLLMEYKPTGEIPNQENLRNCGNIL
NELGTAYLSQHKPSQAREYLKEAWKITQEFSDYSLEIRVINQLGGSYSQQRQFATARSYH
QQALNIAKKQESNHAVANCLFNLGNVSLDTRQFQQARDYYQQALEIKIELGARFESARTY
HQLGRVAQQLREYEQARDYYQQALEIKIEFGARYDSASTYHGLGILARKLREYEQARVYS
QQALEIKIEFGARFESAGTYHNLGIVAQQLREYEQARVYYQQALEIKIEFGARFESASTY
GQLGLLAQDLREYPQARDYYQQALEIYIEYGDRYSQALTLYCLGTLAKAEENYAEARANL
QTALEIYVEYQDEYMATMMQECLEDLPE
Download sequence
Identical sequences K9UXU9
WP_015196636.1.40975 gi|428297648|ref|YP_007135954.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]