SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|427740228|ref|YP_007059772.1| from Rivularia sp. PCC 7116

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427740228|ref|YP_007059772.1|
Domain Number 1 Region: 87-305
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 2.9e-66
Family Prokaryotic proteases 0.00000335
Further Details:      
 
Domain Number 2 Region: 283-415
Classification Level Classification E-value
Superfamily PDZ domain-like 9.73e-23
Family HtrA-like serine proteases 0.0046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|427740228|ref|YP_007059772.1|
Sequence length 420
Comment trypsin-like serine protease with C-terminal PDZ domain [Rivularia sp. PCC 7116]
Sequence
MNKEDLFLILSNIYTKNWTKSLWAKNFILAFFVTISTGLISSCSLPSQIIGSRTPQQTAQ
AERKDDNVAKIAPPPIFKNSRDPNFVVSVVQEVGPAVVRIDTSKTVTSRVPDQFNDPFFR
RFFGSRVPVEPRERQQRGNGSGFIISSNGEILTNAHVVDGADRVTVELKDGRKFNGQVLG
EDPVTDVAVIKIDADNLPTVPLGDSERLQPGEAVIAIGNPLGLNYTVTSGIISATGRSSS
DIGASDKRVDYIQTDAAINPGNSGGPLLSAQGRVIGMNTAIIRGAQGLGFAIPVNTVKRI
SEQLISKGRVDHPYLGIQMVTLTPEVKEKLNSEIGNPNISSDKGVLLIRIMRGSPASQGG
LKAGDVIVSINKQSVKRNEDVQKIVENSKIGQPLSLKVERNGRSVNLTVRPAPLPAANRS
Download sequence
Identical sequences K9RMQ1
gi|427740228|ref|YP_007059772.1| WP_015122774.1.44015

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]