SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428307300|ref|YP_007144125.1| from Crinalium epipsammum PCC 9333

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428307300|ref|YP_007144125.1|
Domain Number 1 Region: 137-253
Classification Level Classification E-value
Superfamily TPR-like 0.00000000000522
Family Tetratricopeptide repeat (TPR) 0.012
Further Details:      
 
Domain Number 2 Region: 52-172
Classification Level Classification E-value
Superfamily TPR-like 0.0000361
Family Tetratricopeptide repeat (TPR) 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428307300|ref|YP_007144125.1|
Sequence length 327
Comment hypothetical protein Cri9333_3805 [Crinalium epipsammum PCC 9333]
Sequence
MKNWLSAPVRVVSAIATFTALSLWVTPIFAKDIFRTTNTRNIGDNTEAAFKALFKEGNYP
EARRYLKLAESTDKNEPLAYAIQASFAFKDQDWNAFKFYSTKTMQLAQQINRNDPVRGNL
YTAVGYFLEGTYSFKQDNSLAALTKLQQVFQYLDEAKKIAPNDPEVNLLKGYMDLILSVN
LPFSDPSQGIESLEKYASPGYLANRGIAVGYRDLKQYNKALEYVNKALQQAPKNPELFYL
KAQILAFQGNTQKNSALFKEANNNFKTALSKSNQLPKWIVSQIFYEHCQTQMLIDIKQRD
CYAYKQQIDNGSGKWGPAKLPQLTINN
Download sequence
Identical sequences K9W596
gi|428307300|ref|YP_007144125.1| WP_015204715.1.21814

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]