SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from Please contact us if you experience any problems.

Domain assignment for Solyc01g090730.2.1 from Solanum lycopersicum v.2.3

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  Solyc01g090730.2.1
Domain Number 1 Region: 164-241
Classification Level Classification E-value
Superfamily SBT domain 1.44e-37
Family SBT domain 0.0000369
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc01g090730.2.1
Sequence length 299
Comment genomic_reference:SL2.40ch01 gene_region:76128945-76132811 transcript_region:SL2.40ch01:76128945..76132811+ go_terms:GO:0005634 functional_description:"Squamosa promoter binding protein 1 (AHRD V1 *-*- Q1MU24_PHYPA); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box "
Download sequence
Identical sequences K4AZ14
Solyc01g090730.2.1 Sopim01g090730.0.1 XP_004229775.1.44838 Solyc01g090730.2.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]