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Domain assignment for Solyc01g090730.2.1 from Solanum lycopersicum v.2.3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Solyc01g090730.2.1
Domain Number 1 Region: 164-241
Classification Level Classification E-value
Superfamily SBT domain 1.44e-37
Family SBT domain 0.0000369
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Solyc01g090730.2.1
Sequence length 299
Comment genomic_reference:SL2.40ch01 gene_region:76128945-76132811 transcript_region:SL2.40ch01:76128945..76132811+ go_terms:GO:0005634 functional_description:"Squamosa promoter binding protein 1 (AHRD V1 *-*- Q1MU24_PHYPA); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box "
Sequence
MLDYEWENQSSFMFTSDQNTQEENDQNNNQFLDPQAHFPHITSYQHPQQQQQQQLQNPHF
PQFQATPNNTHLISSMYDPRAYGVPYTQTHDTSMLSLQPTGGFMVVPKSEPQFGGGIHDF
SSSSSRIGLNLGGRTYFASSSEDDFVNRLYRRTRAVDAGSVNSPKCQAEGCNADLTHAKH
YHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHVLSEFDNGKRSCRKRLADHNRRRRKN
IQQENNKKQPQPSSKSPAESGAQSSTVTVAISPPRIPVDGFRQRTYQQVTTSSSFPMGD
Download sequence
Identical sequences K4AZ14
Solyc01g090730.2.1 Sopim01g090730.0.1 XP_004229775.1.44838 Solyc01g090730.2.1

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