SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Nonstructural protein ns2, Nep, M1-binding domain superfamily domain assignments
in
PDB chains (SCOP 1.75)

Network of domain occurrence in all genomes


Assignment details

(show help)


PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
1pd3A   1.02e-30   5-58   Nonstructural protein ns2, Nep, M1-binding domain  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Nonstructural protein ns2, Nep, M1-binding domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   59800 59800
No Yes NCBI 2017_08 genome   15 15
No Yes Uniprot 2018_03 genome   48717 48717
No Yes NCBI viral sequences (Viral)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes UniProt viral sequences (Viral)   11054 11054

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]