SUPERFAMILY 1.75 HMM library and genome assignments server

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Superantigen MAM superfamily domain assignments
in
PDB chains (SCOP 1.75)

Network of domain occurrence in all genomes


Assignment details

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PDB chains (SCOP 1.75) (PDB) has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
1r5iD   1.39e-137   3-216   Superantigen MAM  
2icwG   7.32e-137   1-213   Superantigen MAM  
2ojeD   1.39e-137   1-214   Superantigen MAM  

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View all assignments containing a Superantigen MAM domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   86 86
No Yes Amphimedon queenslandica   1 1
No Yes Trichomonas vaginalis   1 1
No Yes Mycoplasma arthritidis 158L3-1   2 2
No Yes NCBI 2017_08 genome   11 11
No Yes Protozoadb 2010_08 (Protozoadb)   2 2
No Yes STRING v9.0.5 (STRING)   3 3
No Yes Uniprot 2018_03 genome   10 10
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   8 8
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   40 40

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