SUPERFAMILY 1.75 HMM library and genome assignments server

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Scaffolding protein gpD of bacteriophage procapsid superfamily domain assignments

Network of domain occurrence in all genomes



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View all assignments containing a Scaffolding protein gpD of bacteriophage procapsid domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   1258 1258
No Yes Pinus taeda Loblolly pine 1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes NCBI 2017_08 genome   803 803
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   248 248
No Yes Global Ocean Sampling Expedition (GOS)   76 76
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes NCBI viral sequences (Viral)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   14 14
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   33 33
No Yes UniProt viral sequences (Viral)   66 66

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]