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CI-2 family of serine protease inhibitors superfamily domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 40 significant domains in 40 proteins.

     

Sequence ID   Evalue   Region   Family  
1ciqA   3.81e-22   2-40   CI-2 family of serine protease inhibitors  
1ciqB   0.000000000124   1-24   CI-2 family of serine protease inhibitors  
1cirA   1.83e-21   2-39   CI-2 family of serine protease inhibitors  
1cisA   8.79e-27   2-66   CI-2 family of serine protease inhibitors  
1coaI   6.96e-38   2-64   CI-2 family of serine protease inhibitors  
1cq4A   1.1e-22   2-41   CI-2 family of serine protease inhibitors  
1cseI   7.1e-20   4-70   CI-2 family of serine protease inhibitors  
1dwmA   5.63e-24   3-68   CI-2 family of serine protease inhibitors  
1egpA   0.00000000556   4-44   CI-2 family of serine protease inhibitors  
1egpB   0.00000041   1-25   CI-2 family of serine protease inhibitors  
1hymA   0.000000000000183   3-43   CI-2 family of serine protease inhibitors  
1hymB   0.00000000000183   1-24   CI-2 family of serine protease inhibitors  
1lw6I   1.17e-36   2-64   CI-2 family of serine protease inhibitors  
1meeI   2.42e-19   2-64   CI-2 family of serine protease inhibitors  
1mitA   2.2e-36   6-69   CI-2 family of serine protease inhibitors  
1sbnI   6.22e-20   4-70   CI-2 family of serine protease inhibitors  
1sibI   4.47e-19   4-70   CI-2 family of serine protease inhibitors  
1tinA   4.32e-25   2-68   CI-2 family of serine protease inhibitors  
1tm1I   2.05e-36   2-64   CI-2 family of serine protease inhibitors  
1tm4I   3e-35   2-64   CI-2 family of serine protease inhibitors  
1tm5I   1.03e-35   2-64   CI-2 family of serine protease inhibitors  
1tm7I   4.98e-35   2-64   CI-2 family of serine protease inhibitors  
1tmgI   1.76e-35   2-64   CI-2 family of serine protease inhibitors  
1to1I   2.27e-34   2-64   CI-2 family of serine protease inhibitors  
1to2I   1.32e-35   2-64   CI-2 family of serine protease inhibitors  
1y1kI   5.64e-35   2-64   CI-2 family of serine protease inhibitors  
1y33I   4.98e-36   2-64   CI-2 family of serine protease inhibitors  
1y34I   1.54e-35   2-64   CI-2 family of serine protease inhibitors  
1y3bI   1.32e-35   2-64   CI-2 family of serine protease inhibitors  
1y3cI   1.68e-34   2-64   CI-2 family of serine protease inhibitors  
1y3dI   8.79e-35   2-64   CI-2 family of serine protease inhibitors  
1y3fI   1.68e-34   2-64   CI-2 family of serine protease inhibitors  
1y48I   3.51e-33   2-64   CI-2 family of serine protease inhibitors  
1y4aI   1.17e-34   2-64   CI-2 family of serine protease inhibitors  
1ypaI   6.22e-35   2-64   CI-2 family of serine protease inhibitors  
1ypbI   1.54e-34   2-64   CI-2 family of serine protease inhibitors  
1ypcI   6.59e-36   2-64   CI-2 family of serine protease inhibitors  
2sniI   1.61e-36   21-83   CI-2 family of serine protease inhibitors  
2tecI   8.79e-20   4-70   CI-2 family of serine protease inhibitors  
3ci2A   1.9e-37   4-66   CI-2 family of serine protease inhibitors  

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Select to display   Genome       Domains   Proteins
No Yes ALL   3974 3974
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   28 28
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   5 5
No Yes Capitella sp. I   1 1
No Yes Schistosoma mansoni   1 1
No Yes Acropora digitifera v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Selaginella moellendorffii   3 3
No Yes Pinus taeda Loblolly pine 2 2
No Yes Picea abies Norway spruce 3 3
No Yes Eucalyptus grandis v201 Rose gum 15 15
No Yes Theobroma cacao B97-61/B2 v1 Cacao 13 11
No Yes Gossypium raimondii v221   9 9
No Yes Citrus clementina v165   13 13
No Yes Citrus sinensis v154 Sweet orange 8 8
No Yes Thellungiella halophila v173   15 15
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 4 4
No Yes Capsella rubella v183   11 11
No Yes Arabidopsis lyrata Lyrate rockcress 7 7
No Yes Arabidopsis thaliana 10 Thale cress 7 7
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 13 13
No Yes Phaseolus vulgaris v186 French bean 3 3
No Yes Glycine max v109 Soybean 8 8
No Yes Cucumis sativus v122 Cucumber 24 24
No Yes Fragaria vesca Wild strawberry 6 5
No Yes Malus domestica v196 Apple 11 10
No Yes Prunus persica v139 Peach 11 11
No Yes Linum usitatissimum v200 Flax 12 12
No Yes Manihot esculenta v147 Cassava 13 13
No Yes Populus trichocarpa v156 Black cottonwood 24 24
No Yes Vitis vinifera Wine grape 6 6
No Yes Mimulus guttatus v140 Spotted monkey flower 18 18
No Yes Solanum lycopersicum v.2.3 Tomato 22 22
No Yes Solanum tuberosum Potato 17 16
No Yes Actinidia chinensis Hongyang   5 5
No Yes Aquilegia coerulea v195   7 7
No Yes Triticum urartu 22   50 49
No Yes Triticum aestivum 22 Bread wheat 91 91
No Yes Aegilops tauschii 22   40 40
No Yes Brachypodium distachyon Stiff brome 18 18
No Yes Oryza barthii 22 African wild rice 21 18
No Yes Oryza meridionalis 22   12 12
No Yes Oryza glumaepatula 22   20 16
No Yes Oryza glaberrima African rice 15 15
No Yes Oryza punctata 22   10 10
No Yes Oryza nivara 22   15 15
No Yes Oryza brachyantha 22 Malo sina 13 12
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 16 16
No Yes Oryza sativa v193 Rice 16 16
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 4 4
No Yes Panicum virgatum v202 Switchgrass 54 53
No Yes Setaria italica v164 Foxtail millet 30 30
No Yes Zea mays subsp. mays Maize 25 25
No Yes Zea mays v181 Maize 46 46
No Yes Sorghum bicolor Sorghum 24 24
No Yes Musa balbisiana Balbis banana 3 2
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   5 5
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Chlorella vulgaris   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Ectocarpus siliculosus   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   10 10
No Yes Paramecium tetraurelia   3 3
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   6 6
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 12 12
No Yes Hordeum vulgare 22 Domesticated barley 20 20
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 19 19
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Lotus japonicus (Early assembly)   4 4
No Yes Malus x domestica (Duplicate) Apple 11 10
No Yes Ricinus communis (Early assembly) Castor bean 5 5
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   17 16
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 22 22
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 22 22
No Yes Phoenix dactylifera (Early draft) Date palm 3 3
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes NCBI 2017_08 genome   579 577
No Yes STRING v9.0.5 (STRING)   121 121
No Yes Uniprot 2018_03 genome   1555 1526
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   40 40
No Yes Protein Data Bank (all PDB sequenc)   66 66
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   178 178

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