SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


XRCC4, C-terminal oligomerization domain superfamily domain assignments
in
all genomes

Assignment details

(show help)

25 selected genomes have 33 significant domains in 33 proteins.

Showing genomes 1 to 25 of 398
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Homo sapiens 76_38 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000282268   5.36e-32   118-208   XRCC4, C-terminal oligomerization domain  
ENSP00000342011   5.36e-32   118-208   XRCC4, C-terminal oligomerization domain  
ENSP00000379344   5.36e-32   118-208   XRCC4, C-terminal oligomerization domain  
ENSP00000421491   5.36e-32   118-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSP00000345777   0.0523   101-136   XRCC4, C-terminal oligomerization domain  
ENSP00000347532   0.00445   13-55   XRCC4, C-terminal oligomerization domain  
ENSP00000376636   0.00392   13-55   XRCC4, C-terminal oligomerization domain  
ENSP00000382809   0.0523   101-136   XRCC4, C-terminal oligomerization domain  
ENSP00000382810   0.0523   101-136   XRCC4, C-terminal oligomerization domain  
ENSP00000382812   0.0523   101-136   XRCC4, C-terminal oligomerization domain  
ENSP00000382816   0.0523   101-136   XRCC4, C-terminal oligomerization domain  
ENSP00000382817   0.0523   101-136   XRCC4, C-terminal oligomerization domain  
ENSP00000404220   0.0445   251-296   XRCC4, C-terminal oligomerization domain  
ENSP00000437121   0.0445   211-246   XRCC4, C-terminal oligomerization domain  
ENSP00000437846   0.0471   95-130   XRCC4, C-terminal oligomerization domain  
ENSP00000441784   0.0994   146-185   XRCC4, C-terminal oligomerization domain  
ENSP00000480109   0.00262   13-55   XRCC4, C-terminal oligomerization domain  

Pan troglodytes 76_2.1.4 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000029192   5.36e-32   118-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSPTRP00000027357   0.0366   211-246   XRCC4, C-terminal oligomerization domain  
ENSPTRP00000057882   0.00471   13-55   XRCC4, C-terminal oligomerization domain  

Gorilla gorilla 76_3.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000005093   3.92e-32   118-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSGGOP00000012206   0.00471   13-55   XRCC4, C-terminal oligomerization domain  
ENSGGOP00000012696   0.0759   170-221   XRCC4, C-terminal oligomerization domain  
ENSGGOP00000015740   0.0445   251-296   XRCC4, C-terminal oligomerization domain  
ENSGGOP00000018148   0.0366   77-112   XRCC4, C-terminal oligomerization domain  
ENSGGOP00000023704   0.0112   339-389   XRCC4, C-terminal oligomerization domain  
ENSGGOP00000027782   0.00471   13-55   XRCC4, C-terminal oligomerization domain  

Pongo abelii 76_2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000017453   3.66e-32   117-207   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSPPYP00000003137   0.00471   13-55   XRCC4, C-terminal oligomerization domain  
ENSPPYP00000023658   0.0523   101-136   XRCC4, C-terminal oligomerization domain  

Nomascus leucogenys 76_1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000016096   3.92e-32   118-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSNLEP00000004062   0.0523   101-136   XRCC4, C-terminal oligomerization domain  
ENSNLEP00000007743   0.0759   445-481   XRCC4, C-terminal oligomerization domain  
ENSNLEP00000011387   0.068   95-132   XRCC4, C-terminal oligomerization domain  
ENSNLEP00000020077   0.00628   13-55   XRCC4, C-terminal oligomerization domain  
ENSNLEP00000020080   0.00602   13-55   XRCC4, C-terminal oligomerization domain  

Papio anubis 76 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000001399   7.19e-32   118-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSPANP00000001629   0.0471   292-337   XRCC4, C-terminal oligomerization domain  
ENSPANP00000016472   0.00445   13-55   XRCC4, C-terminal oligomerization domain  
ENSPANP00000016473   0.011   18-55   XRCC4, C-terminal oligomerization domain  
ENSPANP00000018451   0.0262   195-238   XRCC4, C-terminal oligomerization domain  
ENSPANP00000018791   0.0575   102-136   XRCC4, C-terminal oligomerization domain  

Macaca mulatta 76_1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000028464   7.19e-32   118-208   XRCC4, C-terminal oligomerization domain  
ENSMMUP00000034364   7.32e-32   118-208   XRCC4, C-terminal oligomerization domain  
ENSMMUP00000034365   7.19e-32   118-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSMMUP00000004039   0.0575   102-136   XRCC4, C-terminal oligomerization domain  
ENSMMUP00000009946   0.0314   1-36   XRCC4, C-terminal oligomerization domain  

Callithrix jacchus 76_3.2.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000020686   9.81e-32   118-207   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000023938   7.85e-32   118-207   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000023961   9.94e-32   118-207   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSCJAP00000000172   0.0392   252-296   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000015903   0.0497   102-136   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000036152   0.00209   13-55   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000036194   0.0222   23-57   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000036197   0.00249   72-114   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000041991   0.0497   102-136   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000044774   0.0034   13-55   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000047294   0.0178   46-81   XRCC4, C-terminal oligomerization domain  
ENSCJAP00000050122   0.00209   13-55   XRCC4, C-terminal oligomerization domain  

Otolemur garnettii 76_3 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000008109   3.53e-32   119-207   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSOGAP00000003075   0.00602   13-55   XRCC4, C-terminal oligomerization domain  
ENSOGAP00000004113   0.0126   253-295   XRCC4, C-terminal oligomerization domain  
ENSOGAP00000005648   0.00837   225-265   XRCC4, C-terminal oligomerization domain  

Rattus norvegicus 76_5.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000048754   2.01e-31   118-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSRNOP00000000794   0.0575   171-222   XRCC4, C-terminal oligomerization domain  
ENSRNOP00000002158   0.0418   102-136   XRCC4, C-terminal oligomerization domain  
ENSRNOP00000011336   0.0102   225-265   XRCC4, C-terminal oligomerization domain  
ENSRNOP00000029466   0.0238   634-669   XRCC4, C-terminal oligomerization domain  
ENSRNOP00000037916   0.0207   293-337   XRCC4, C-terminal oligomerization domain  
ENSRNOP00000042594   0.0118   421-462   XRCC4, C-terminal oligomerization domain  
ENSRNOP00000061843   0.00497   10-47   XRCC4, C-terminal oligomerization domain  

Mus musculus 76_38 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000022115   5.23e-33   118-209   XRCC4, C-terminal oligomerization domain  
ENSMUSP00000123934   4.88e-33   118-209   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSMUSP00000025681   0.00288   631-668   XRCC4, C-terminal oligomerization domain  
ENSMUSP00000030311   0.00837   225-265   XRCC4, C-terminal oligomerization domain  
ENSMUSP00000041378   0.00445   13-55   XRCC4, C-terminal oligomerization domain  
ENSMUSP00000097254   0.0497   171-222   XRCC4, C-terminal oligomerization domain  
ENSMUSP00000102721   0.00471   225-265   XRCC4, C-terminal oligomerization domain  
ENSMUSP00000113616   0.00641   321-365   XRCC4, C-terminal oligomerization domain  
ENSMUSP00000121422   0.0445   84-126   XRCC4, C-terminal oligomerization domain  
ENSMUSP00000126227   0.00262   13-55   XRCC4, C-terminal oligomerization domain  

Dipodomys ordii 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000014942   1.01e-30   118-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSDORP00000003017   0.0327   135-170   XRCC4, C-terminal oligomerization domain  
ENSDORP00000006054   0.0131   201-239   XRCC4, C-terminal oligomerization domain  
ENSDORP00000006147   0.0575   8-54   XRCC4, C-terminal oligomerization domain  
ENSDORP00000006938   0.0785   2-35   XRCC4, C-terminal oligomerization domain  
ENSDORP00000009521   0.0107   151-189   XRCC4, C-terminal oligomerization domain  
ENSDORP00000010995   0.000123   614-659   XRCC4, C-terminal oligomerization domain  
ENSDORP00000012775   0.00235   253-296   XRCC4, C-terminal oligomerization domain  

Ictidomys tridecemlineatus 76_2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000021064   2.22e-31   119-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSSTOP00000008804   0.00118   582-617   XRCC4, C-terminal oligomerization domain  
ENSSTOP00000011387   0.00144   255-296   XRCC4, C-terminal oligomerization domain  
ENSSTOP00000017871   0.0288   59-93   XRCC4, C-terminal oligomerization domain  
ENSSTOP00000019289   0.0262   228-263   XRCC4, C-terminal oligomerization domain  
ENSSTOP00000023252   0.0023   53-92   XRCC4, C-terminal oligomerization domain  

Heterocephalus glaber v1.7-2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000342011   3.58e-30   118-207   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
HGL_H00000277746-2   0.0628   172-223   XRCC4, C-terminal oligomerization domain  
HGL_H00000284881   0.0981   359-396   XRCC4, C-terminal oligomerization domain  
HGL_H00000335309   0.00196   70-101   XRCC4, C-terminal oligomerization domain  
HGL_H00000345133   0.000968   624-664   XRCC4, C-terminal oligomerization domain  
HGL_H00000369402   0.00628   223-263   XRCC4, C-terminal oligomerization domain  
HGL_H00000376636-1   0.00445   6-44   XRCC4, C-terminal oligomerization domain  
HGL_H00000400718   0.00628   114-151   XRCC4, C-terminal oligomerization domain  
HGL_H00000404220   0.0178   253-296   XRCC4, C-terminal oligomerization domain  
HGL_N10012445   0.000876   16-55   XRCC4, C-terminal oligomerization domain  
HGL_N10027016   0.0112   20-55   XRCC4, C-terminal oligomerization domain  

Cavia porcellus 76_3 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000011024   1.7e-31   118-206   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSCPOP00000004734   0.0017   253-297   XRCC4, C-terminal oligomerization domain  
ENSCPOP00000007283   0.00144   150-190   XRCC4, C-terminal oligomerization domain  
ENSCPOP00000007323   0.000706   622-661   XRCC4, C-terminal oligomerization domain  
ENSCPOP00000009872   0.0139   12-48   XRCC4, C-terminal oligomerization domain  
ENSCPOP00000011688   0.00191   223-265   XRCC4, C-terminal oligomerization domain  
ENSCPOP00000012775   0.0314   170-221   XRCC4, C-terminal oligomerization domain  

Oryctolagus cuniculus 76_2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000012933   2.62e-31   119-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSOCUP00000000113   0.0262   318-354   XRCC4, C-terminal oligomerization domain  
ENSOCUP00000001139   0.00706   224-265   XRCC4, C-terminal oligomerization domain  
ENSOCUP00000005886   0.0732   107-150   XRCC4, C-terminal oligomerization domain  
ENSOCUP00000007690   0.0207   2-37   XRCC4, C-terminal oligomerization domain  
ENSOCUP00000009578   0.000732   29-71   XRCC4, C-terminal oligomerization domain  
ENSOCUP00000024711   0.0889   127-161   XRCC4, C-terminal oligomerization domain  

Ochotona princeps 76 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000001686   3.79e-26   131-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSOPRP00000010337   0.0112   613-650   XRCC4, C-terminal oligomerization domain  
ENSOPRP00000014190   0.0915   168-218   XRCC4, C-terminal oligomerization domain  

Tupaia belangeri 76 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000002167   3.92e-31   119-208   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSTBEP00000001887   0.0262   438-481   XRCC4, C-terminal oligomerization domain  
ENSTBEP00000002827   0.00523   225-265   XRCC4, C-terminal oligomerization domain  
ENSTBEP00000005019   0.00785   133-184   XRCC4, C-terminal oligomerization domain  
ENSTBEP00000005655   0.0719   229-263   XRCC4, C-terminal oligomerization domain  
ENSTBEP00000012260   0.0759   2-35   XRCC4, C-terminal oligomerization domain  
ENSTBEP00000015170   0.0915   21-64   XRCC4, C-terminal oligomerization domain  

Sus scrofa 76_10.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000015030   9.16e-32   118-207   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSSSCP00000003439   0.00497   216-259   XRCC4, C-terminal oligomerization domain  
ENSSSCP00000005508   0.00837   224-265   XRCC4, C-terminal oligomerization domain  
ENSSSCP00000011364   0.00471   13-55   XRCC4, C-terminal oligomerization domain  
ENSSSCP00000011492   0.0994   150-191   XRCC4, C-terminal oligomerization domain  
ENSSSCP00000012810   0.0445   79-113   XRCC4, C-terminal oligomerization domain  
ENSSSCP00000013843   0.0011   630-667   XRCC4, C-terminal oligomerization domain  
ENSSSCP00000023740   0.0471   173-224   XRCC4, C-terminal oligomerization domain  
ENSSSCP00000025538   0.0445   170-221   XRCC4, C-terminal oligomerization domain  

Bos taurus 76_3.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000040350   4.19e-32   119-207   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSBTAP00000000161   0.0123   400-441   XRCC4, C-terminal oligomerization domain  
ENSBTAP00000001832   0.0732   229-263   XRCC4, C-terminal oligomerization domain  
ENSBTAP00000026073   0.00759   225-265   XRCC4, C-terminal oligomerization domain  
ENSBTAP00000048712   0.0175   172-223   XRCC4, C-terminal oligomerization domain  

Ovis aries 76_3.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000016746   3.92e-32   119-207   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSOARP00000006332   0.0288   420-461   XRCC4, C-terminal oligomerization domain  
ENSOARP00000008781   0.00706   202-272   XRCC4, C-terminal oligomerization domain  
ENSOARP00000010270   0.0863   150-189   XRCC4, C-terminal oligomerization domain  
ENSOARP00000011022   0.00314   576-613   XRCC4, C-terminal oligomerization domain  
ENSOARP00000015604   0.00314   225-265   XRCC4, C-terminal oligomerization domain  
ENSOARP00000016934   0.0693   229-263   XRCC4, C-terminal oligomerization domain  
ENSOARP00000019232   0.00759   11-48   XRCC4, C-terminal oligomerization domain  

Vicugna pacos 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000001262   3.01e-25   121-201   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSVPAP00000002201   0.0034   13-55   XRCC4, C-terminal oligomerization domain  

Tursiops truncatus 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000008563   6.8e-31   118-207   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSTTRP00000000352   0.0759   2-35   XRCC4, C-terminal oligomerization domain  
ENSTTRP00000005094   0.000222   252-295   XRCC4, C-terminal oligomerization domain  
ENSTTRP00000010442   0.0876   229-263   XRCC4, C-terminal oligomerization domain  
ENSTTRP00000013097   0.0068   166-253   XRCC4, C-terminal oligomerization domain  

Mustela putorius furo 76_1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000008035   1.48e-30   292-380   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSMPUP00000002643   0.00165   253-296   XRCC4, C-terminal oligomerization domain  
ENSMPUP00000007092   0.0471   417-459   XRCC4, C-terminal oligomerization domain  
ENSMPUP00000007255   0.00889   9-63   XRCC4, C-terminal oligomerization domain  
ENSMPUP00000010674   0.0366   230-263   XRCC4, C-terminal oligomerization domain  
ENSMPUP00000011016   0.0575   170-221   XRCC4, C-terminal oligomerization domain  
ENSMPUP00000015781   0.068   119-153   XRCC4, C-terminal oligomerization domain  
ENSMPUP00000015834   0.00915   225-265   XRCC4, C-terminal oligomerization domain  

Ailuropoda melanoleuca 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSAMEP00000007849   7.06e-31   14-102   XRCC4, C-terminal oligomerization domain  
 
Weak hits:
ENSAMEP00000005849   0.00654   225-265   XRCC4, C-terminal oligomerization domain  
ENSAMEP00000011103   0.0418   386-425   XRCC4, C-terminal oligomerization domain  
ENSAMEP00000014938   0.000759   253-296   XRCC4, C-terminal oligomerization domain  

  1 2 3 4 5 6 7 8 9 10 11   Next Last
Showing genomes 1 to 25 of 398

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a XRCC4, C-terminal oligomerization domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   3167 3167
No Yes Homo sapiens 76_38 Human 4 4
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 1 1
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Papio anubis 76 Olive baboon 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 76_3 Small-eared galago 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 1 1
No Yes Mus musculus 76_38 House mouse 2 2
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1 1
No Yes Cavia porcellus 76_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 1 1
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 1 1
No Yes Ovis aries 76_3.1 Sheep 1 1
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Canis familiaris 76_3.1 Dog 2 2
No Yes Felis catus 76_6.2 Domestic cat 1 1
No Yes Equus caballus 76_2 Horse 1 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 1 1
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 2
No Yes Saccoglossus kowalevskii v3.0   2 2
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Anas platyrhynchos 76_1.0 Mallard 3 3
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 76_2.0 Green anole 1 1
No Yes Xenopus laevis African clawed frog 2 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 76_1 Coelacanth 1 1
No Yes Lepisosteus oculatus 76 Spotted gar 1 1
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 76_4 Torafugu 3 3
No Yes Oryzias latipes 76_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 3 3
No Yes Poecilia formosa 76 Amazon molly 3 3
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 4 4
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   3 3
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 2 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 1 1
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Hydra vulgaris   1 1
No Yes Amphimedon queenslandica   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   1 1
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   1 1
No Yes Fusarium oxysporum f. sp. lycopersici 4286   1 1
No Yes Fusarium verticillioides 7600   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   2 2
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   1 1
No Yes Cochliobolus carbonum 26-R-13 v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   1 1
No Yes Stagonospora nodorum   1 1
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   1 1
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   1 1
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   2 2
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus terreus NIH2624   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus wentii v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Hansenula polymorpha v2.0   1 1
No Yes Candida albicans SC5314   1 1
No Yes Pichia stipitis CBS 6054   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   1 1
No Yes Kluyveromyces waltii   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   1 1
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Selaginella moellendorffii   2 2
No Yes Pinus taeda Loblolly pine 1 1
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   1 1
No Yes Citrus clementina v165   3 3
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   2 2
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 3 3
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 2 2
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Linum usitatissimum v200 Flax 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 2 2
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   1 1
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   2 2
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Ectocarpus siliculosus   1 1
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   1 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   1 1
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phytophthora sojae 1.1   2 2
No Yes Phytophthora infestans T30-4   1 1
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Paramecium tetraurelia   1 1
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Neospora caninum   1 1
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   1 1
No Yes Naegleria gruberi   1 1
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Rickettsia bellii OSU 85-389   1 1
No Yes Bartonella bacilliformis KC583   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 4 4
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Paracoccidioides brasiliensis Pb01   1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Candida albicans WO-1   1 1
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae M22   1 1
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Neospora caninum Nc-Liverpool 6.2   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 4 4
No Yes Homo sapiens (NCBI version) Human 3 3
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Homo sapiens 69_37 Human 1 1
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 1 1
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 69_3 Small-eared galago 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 1 1
No Yes Mus musculus 69_38 House mouse 1 1
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 2
No Yes Ochotona princeps 69 American pika 1 1
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 1 1
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Canis familiaris 69_3.1 Dog 1 1
No Yes Equus caballus 69_2 Horse 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 1 1
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 2
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 1 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 69_2.0 Green anole 1 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 69_4 Torafugu 2 2
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 3 3
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Danio rerio 69_9 Zebrafish 1 1
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes 4_050719Q (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Mouse Gut Community lean1 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   1133 1132
No Yes Protozoadb 2010_08 (Protozoadb)   2 2
No Yes STRING v9.0.5 (STRING)   94 94
No Yes Uniprot 2018_03 genome   1127 1124
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   38 38
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   51 51

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]