SUPERFAMILY 1.75 HMM library and genome assignments server

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Molybdenum cofactor biosynthesis proteins superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 12 SUPERFAMILY models representing the Molybdenum cofactor biosynthesis proteins superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0052616 1840 2008-09-10 d2f7wa1 MogA-like
0040986 493 2005-09-08 d1mkza_ MogA-like
0036881 635 2005-09-08 d1eava_ MogA-like
0051200 2502 2008-09-10 d1y5ea1 MogA-like
0039613 523 2005-09-08 d1jlja_ MogA-like
0052822 1294 2008-09-10 d2g2ca1 MogA-like
0036437 452 2005-09-08 d1di6a_ MogA-like
0037993 677 2005-09-08 d1g8la3 MoeA central domain-like
0050702 2211 2008-09-10 d1wu2a3 MoeA central domain-like
0044572 696 2005-09-08 d1uz5a3 MoeA central domain-like
0050976 2276 2008-09-10 d1xi8a3 MoeA central domain-like
0043851 695 2005-09-08 d1t3ea3 MoeA central domain-like