SUPERFAMILY 1.75 HMM library and genome assignments server

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Tubulin C-terminal domain-like superfamily models

A superfamily is represented by one or more models; usually there is more than one model representing the superfamily. Since each model is built to capture the whole superfamily, they are likely to be overlapping and sometimes are mostly overlapping or even redundant to each other. Also models often do not score their own seed sequence more highly than other sequences in the superfamily, so it is a mistake to think that the model represents the seed sequence.

All models are available for immediate download after obtaining a license by filling in a short online registration form. Licenses are free for academic and commercial purposes.

Plots showing hydrophobicity, match emmission probabilities and insertion/deletion probabilities can be viewed for each model by following the model ID link.

All 7 SUPERFAMILY models representing the Tubulin C-terminal domain-like superfamily
Model ID No. of seqs Build date Seed sequence Family of seed
0050369 1455 2008-09-10 d1w5ba2 Tubulin, C-terminal domain
0044123 486 2005-09-08 d1tubb2 Tubulin, C-terminal domain
0053758 1342 2010-05-31 d2btoa2 Tubulin, C-terminal domain
0049230 1447 2008-09-10 d1rq2a2 Tubulin, C-terminal domain
0044121 469 2005-09-08 d1tuba2 Tubulin, C-terminal domain
0050372 1428 2008-09-10 d1w5fa2 Tubulin, C-terminal domain
0048559 1444 2008-09-10 d1ofua2 Tubulin, C-terminal domain