SUPERFAMILY 1.75 HMM library and genome assignments server

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Plant ANatomical entity (PAN): stele

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term (+ for parents, - for children) AP term [AP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   plant anatomical entity [PO:0025131] <3>
+ + + 3:   plant structure [PO:0009011] <13>(589|796) (590|352|108)
+ + + 3:   multi-tissue plant structure [PO:0025496] <4>(317|465) (320|215|71)
+ + 2:   cardinal part of multi-tissue plant structure [PO:0025498] <8>(185|291) (186|132|50)
+ + 2:   plant organ [PO:0009008] <10>(308|459) (311|212|70)
+ 1:   plant axis [PO:0025004] <12>(241|376) (242|173|62)
+ 1:   cardinal organ part [PO:0025001] <61>(182|290) (183|132|50)
0:   stele [PO:0025197] <2>(10|9) (10|1|0)
- 1:   root stele [PO:0020124] <3>(7|7) (7|0|0)
- 1:   shoot axis stele [PO:0025198] <3>(4|3) (4|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Chlorophyll a-b binding protein0.00000005711Direct
RuBisCO, small subunit0.0000002866Direct
Transducin (alpha subunit), insertion domain0.0000002866Direct
NAC domain0.000001923Direct
HD-domain/PDEase-like0.000003422Direct
Cullin repeat-like0.00004052Direct
Trimeric LpxA-like enzymes0.00005915Direct
Subtilisin-like0.0001331Direct
CheY-like0.000636Direct
Homeodomain-like0.0008373Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
MioX-like0Direct
Serine acetyltransferase0.000000004197Direct
Chlorophyll a-b binding protein0.0000000883Direct
Transducin (alpha subunit), insertion domain0.0000002431Direct
NAC domain0.00000188Direct
Exocyst complex component0.000004216Direct
Subtilases0.0001266Direct
Homeodomain0.001098Inherited
Leucine zipper domain0.006289Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Chlorophyll a-b binding protein0.00000004424Direct
RuBisCO, small subunit0.0000002224Direct
Transducin (alpha subunit), insertion domain0.0000002224Direct
NAC domain0.000001494Direct
HD-domain/PDEase-like0.000002662Direct
Cullin repeat-like0.00003167Direct
Trimeric LpxA-like enzymes0.00004627Direct
Subtilisin-like0.0001044Direct
CheY-like0.0005026Direct
Homeodomain-like0.0006626Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000002224Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)