Family Assignments

Domains Proteins SCOP Link Families
36 36 SCOP 52686 ABC transporter ATPase domain-like
11 11 SCOP 51446 Amylase, catalytic domain
10 10 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
9 9 SCOP 52592 G proteins
9 6 SCOP 81268 Tandem AAA-ATPase domain
8 4 SCOP 53068 Actin/HSP70
8 8 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
8 6 SCOP 81269 Extended AAA-ATPase domain
7 7 SCOP 53402 Cystathionine synthase-like
6 6 SCOP 51487 beta-glycanases
6 6 SCOP 52318 Class I glutamine amidotransferases (GAT)
6 6 SCOP 53417 GABA-aminotransferase-like
6 6 SCOP 53687 Tryptophan synthase beta subunit-like PLP-dependent enzymes
6 6 SCOP 53851 Phosphate binding protein-like
6 6 SCOP 161099 MetI-like
5 5 SCOP 52652 Nitrogenase iron protein-like
5 2 SCOP 55974 S-adenosylmethionine synthetase
4 4 SCOP 52173 CheY-related
4 4 SCOP 53384 AAT-like
4 2 SCOP 53902 Thiolase-related
4 4 SCOP 56236 Class II glutamine amidotransferases
4 4 SCOP 56802 Acetyl-CoA synthetase-like
4 2 SCOP 89572 Biotin dependent carboxylase carboxyltransferase domain
3 3 SCOP 48257 Citrate synthase
3 3 SCOP 50282 Cold shock DNA-binding domain-like
3 3 SCOP 50678 ValRS/IleRS/LeuRS editing domain
3 3 SCOP 51396 FMN-linked oxidoreductases
3 3 SCOP 51751 Tyrosine-dependent oxidoreductases
3 3 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
3 2 SCOP 52441 BC N-terminal domain-like
3 3 SCOP 52541 Nucleotide and nucleoside kinases
3 3 SCOP 53272 Phosphoribosyltransferases (PRTases)
3 3 SCOP 53614 Ribokinase-like
3 3 SCOP 53823 L-arabinose binding protein-like
3 3 SCOP 55921 Creatinase/aminopeptidase
3 2 SCOP 56067 BC ATP-binding domain-like
3 3 SCOP 69892 Iron-containing alcohol dehydrogenase
3 3 SCOP 102945 RelA/SpoT domain
3 3 SCOP 111353 Ammonium transporter
3 3 SCOP 142721 PyrH-like
2 2 SCOP 46903 Spo0A
2 2 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
2 2 SCOP 48213 Cellulases catalytic domain
2 2 SCOP 48558 L-aspartase/fumarase
2 2 SCOP 51381 Tryptophan biosynthesis enzymes
2 2 SCOP 51420 Alanine racemase-like, N-terminal domain
2 2 SCOP 51431 Aldo-keto reductases (NADP)
2 2 SCOP 51521 Family 1 of glycosyl hydrolase
2 2 SCOP 51868 6-phosphogluconate dehydrogenase-like, N-terminal domain
2 2 SCOP 52403 N-type ATP pyrophosphatases
2 2 SCOP 52670 RecA protein-like (ATPase-domain)
2 1 SCOP 53080 Acetokinase-like
2 2 SCOP 53099 Ribonuclease H
2 2 SCOP 53138 Ribosomal protein L18 and S11
2 2 SCOP 53168 Purine and uridine phosphorylases
2 2 SCOP 53461 UDP-glucose pyrophosphorylase
2 2 SCOP 53629 Folylpolyglutamate synthetase
2 2 SCOP 53660 Dimeric isocitrate & isopropylmalate dehydrogenases
2 2 SCOP 53733 Aconitase iron-sulfur domain
2 2 SCOP 53766 Oligosaccharide phosphorylase
2 2 SCOP 53785 Phosphofructokinase
2 2 SCOP 55121 Pseudouridine synthase I TruA
2 2 SCOP 55879 DNA gyrase/MutL, N-terminal domain
2 2 SCOP 56323 ADC synthase
2 2 SCOP 56713 Prokaryotic type I DNA topoisomerase
2 2 SCOP 56720 Type II DNA topoisomerase
2 2 SCOP 63588 Glycosyltransferase family 36 C-terminal domain
2 2 SCOP 63733 Glycosyltransferase family 36 N-terminal domain
2 2 SCOP 63818 Sortase
2 2 SCOP 64485 RNA-polymerase beta
2 2 SCOP 75218 SpoU-like RNA 2'-O ribose methyltransferase
2 2 SCOP 81605 PP2C-like
2 2 SCOP 88682 Alanine racemase
2 2 SCOP 88854 Protein kinases, catalytic subunit
2 2 SCOP 89494 HMGL-like
2 2 SCOP 89800 Deoxycytidylate deaminase-like
2 2 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 SCOP 101884 Glycosyl hydrolases family 32 N-terminal domain
2 2 SCOP 110284 TM1225-like predicted glycosylases
2 1 SCOP 110384 Cobalamin-independent methionine synthase
2 2 SCOP 111338 QueA-like
2 2 SCOP 140991 FtsH protease domain-like
2 2 SCOP 142635 hypothetical RNA methyltransferase
2 1 SCOP 143860 Polyphosphate kinase C-terminal domain
1 1 SCOP 46907 Ribosomal protein L11, C-terminal domain
1 1 SCOP 46947 Ribosomal protein S13
1 1 SCOP 47064 Ribosomal protein S15
1 1 SCOP 47447 Signal peptide-binding domain
1 1 SCOP 47730 Prokaryotic DNA-bending protein
1 1 SCOP 47790 C-terminal domain of RNA polymerase alpha subunit
1 1 SCOP 48109 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 SCOP 48184 Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI)
1 1 SCOP 48191 UDP-glucose/GDP-mannose dehydrogenase dimerisation domain
1 1 SCOP 48577 Isoprenyl diphosphate synthases
1 1 SCOP 48593 GroEL chaperone, ATPase domain
1 1 SCOP 49803 beta-Galactosidase/glucuronidase, N-terminal domain
1 1 SCOP 50448 Elongation factors
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 50482 NADH:FMN oxidoreductase-like
1 1 SCOP 50495 Prokaryotic proteases
1 1 SCOP 50693 Pyruvoyl dependent aspartate decarboxylase, ADC
1 1 SCOP 50719 Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain
1 1 SCOP 50892 Cyclophilin (peptidylprolyl isomerase)
1 1 SCOP 51012 alpha-Amylases, C-terminal beta-sheet domain
1 1 SCOP 51168 Galactoside acetyltransferase-like
1 1 SCOP 51191 Type I phosphomannose isomerase
1 1 SCOP 51284 dUTPase-like
1 1 SCOP 51367 Histidine biosynthesis enzymes
1 1 SCOP 51372 D-ribulose-5-phosphate 3-epimerase
1 1 SCOP 51392 Thiamin phosphate synthase
1 1 SCOP 51413 Inosine monophosphate dehydrogenase (IMPDH)
1 1 SCOP 51553 NagZ-like
1 1 SCOP 51570 Class I aldolase
1 1 SCOP 51591 Class II FBP aldolase
1 1 SCOP 51594 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
1 1 SCOP 51605 Enolase
1 1 SCOP 51622 Pyruvate kinase
1 1 SCOP 51629 Pyruvate phosphate dikinase, C-terminal domain
1 1 SCOP 51691 NadC C-terminal domain-like
1 1 SCOP 51714 tRNA-guanine transglycosylase
1 1 SCOP 51718 Dihydropteroate synthetase
1 1 SCOP 51723 Methyltetrahydrofolate-utiluzing methyltransferases
1 1 SCOP 51731 Methylenetetrahydrofolate reductase
1 1 SCOP 51830 Formate/glycerate dehydrogenases, NAD-domain
1 1 SCOP 51934 Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
1 1 SCOP 52005 Class III anaerobic ribonucleotide reductase NRDD subunit
1 1 SCOP 52010 Pyruvate phosphate dikinase, central domain
1 1 SCOP 52017 LeuD-like
1 1 SCOP 52022 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 SCOP 52030 GroEL-like chaperone, apical domain
1 1 SCOP 52081 Ribosomal proteins L15p and L18e
1 1 SCOP 52097 Clp protease, ClpP subunit
1 1 SCOP 52100 Tail specific protease, catalytic domain
1 1 SCOP 52103 Crotonase-like
1 1 SCOP 52122 Lumazine synthase
1 1 SCOP 52142 Uracil-DNA glycosylase
1 1 SCOP 52152 FabD-like
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52256 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52339 Methylglyoxal synthase, MgsA
1 1 SCOP 52410 PAPS reductase-like
1 1 SCOP 52414 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 SCOP 52419 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 SCOP 52471 C-terminal domain of the electron transfer flavoprotein alpha subunit
1 1 SCOP 52789 Low-molecular-weight phosphotyrosine protein phosphatases
1 1 SCOP 52955 Anticodon-binding domain of Class II aaRS
1 1 SCOP 52973 ITPase (Ham1)
1 1 SCOP 52976 Maf-like
1 1 SCOP 53179 Peptidyl-tRNA hydrolase-like
1 1 SCOP 53204 Bacterial dinuclear zinc exopeptidases
1 1 SCOP 53224 Aminoacid dehydrogenases
1 1 SCOP 53235 Tetrahydrofolate dehydrogenase/cyclohydrolase
1 1 SCOP 53240 Malic enzyme N-domain
1 1 SCOP 53245 MurCDEF C-terminal domain
1 1 SCOP 53329 Formyltransferase
1 1 SCOP 53464 glucose-1-phosphate thymidylyltransferase
1 1 SCOP 53624 MurCDEF
1 1 SCOP 53672 Aspartate/ornithine carbamoyltransferase
1 1 SCOP 53698 double-SIS domain
1 1 SCOP 53701 Phosphoglucose isomerase, PGI
1 1 SCOP 53721 ALDH-like
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53760 Peptidoglycan biosynthesis glycosyltransferase MurG
1 1 SCOP 53791 Tetrapyrrole methylase
1 1 SCOP 53796 PEP carboxykinase C-terminal domain
1 1 SCOP 53928 Cytidine deaminase
1 1 SCOP 54198 HIT (HINT, histidine triad) family of protein kinase-interacting proteins
1 1 SCOP 54212 Translational machinery components
1 1 SCOP 54224 DNA gyrase/MutL, second domain
1 1 SCOP 54232 GHMP Kinase, N-terminal domain
1 1 SCOP 54535 FKBP immunophilin/proline isomerase
1 1 SCOP 54632 CBS-domain pair
1 1 SCOP 54748 Ribosomal L11/L12e N-terminal domain
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 54844 Ribosomal protein L22
1 1 SCOP 54914 Prokaryotic signal transducing protein
1 1 SCOP 55000 Ribosomal protein S10
1 1 SCOP 55084 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 SCOP 55178 Ribosomal protein S4
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55195 Ribosome recycling factor, RRF
1 1 SCOP 55209 Enolpyruvate transferase, EPT
1 1 SCOP 55299 YjgF/L-PSP
1 1 SCOP 55368 Dihydrodipicolinate reductase-like
1 1 SCOP 55621 GTP cyclohydrolase I
1 1 SCOP 55654 Ribosomal protein L9 C-domain
1 1 SCOP 55822 YrdC-like
1 1 SCOP 55827 YbaK/ProRS associated domain
1 1 SCOP 55832 Thymidylate synthase/dCMP hydroxymethylase
1 1 SCOP 55932 Glutamine synthetase catalytic domain
1 1 SCOP 56004 Molybdenum cofactor-binding domain
1 1 SCOP 56043 PurM C-terminal domain-like
1 1 SCOP 56085 Pyruvate phosphate dikinase, N-terminal domain
1 1 SCOP 56096 Adenylation domain of NAD+-dependent DNA ligase
1 1 SCOP 56105 SAICAR synthase
1 1 SCOP 56184 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain
1 1 SCOP 56195 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 SCOP 56248 Penicillin V acylase
1 1 SCOP 56421 Peptide deformylase
1 1 SCOP 56554 Insert subdomain of RNA polymerase alpha subunit
1 1 SCOP 56575 Serpins
1 1 SCOP 56753 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 SCOP 56797 Dehydroquinate synthase, DHQS
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 63976 Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
1 1 SCOP 63984 Sir2 family of transcriptional regulators
1 1 SCOP 64006 Undecaprenyl diphosphate synthase
1 1 SCOP 64095 Germination protease
1 1 SCOP 64154 YjeF N-terminal domain-like
1 1 SCOP 64159 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 SCOP 64162 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
1 1 SCOP 64183 Manganese-dependent inorganic pyrophosphatase (family II)
1 1 SCOP 64186 HPr kinase HprK C-terminal domain
1 1 SCOP 64198 AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC
1 1 SCOP 64372 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
1 1 SCOP 64398 Hsp33 domain
1 1 SCOP 64490 RNA-polymerase beta-prime
1 1 SCOP 68924 PEP carboxykinase N-terminal domain
1 1 SCOP 69066 RNase III catalytic domain-like
1 1 SCOP 69337 Alpha subunit of glutamate synthase, C-terminal domain
1 1 SCOP 69427 UDP-galactopyranose mutase, N-terminal domain
1 1 SCOP 69501 DTD-like
1 1 SCOP 69573 Molybdenum cofactor biosynthesis protein MoeB
1 1 SCOP 69602 L-histidinol dehydrogenase HisD
1 1 SCOP 69670 UDP-galactopyranose mutase
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 69865 Argininosuccinate synthetase, C-terminal domain
1 1 SCOP 74656 CoA transferase alpha subunit-like
1 1 SCOP 74657 CoA transferase beta subunit-like
1 1 SCOP 74732 Ribosomal protein L20
1 1 SCOP 75073 Hydantoinase (dihydropyrimidinase), catalytic domain
1 1 SCOP 75264 Glucose-inhibited division protein B (GidB)
1 1 SCOP 75292 YjeF C-terminal domain-like
1 1 SCOP 75297 N-acetyl-l-glutamate kinase
1 1 SCOP 75323 Exonuclease RecJ
1 1 SCOP 75459 Pseudouridine synthase RsuA/RluD
1 1 SCOP 75621 Release factor
1 1 SCOP 75626 YebC-like
1 1 SCOP 81656 Meta-cation ATPase, catalytic domain P
1 1 SCOP 81768 Pre-protein crosslinking domain of SecA
1 1 SCOP 81887 Helical scaffold and wing domains of SecA
1 1 SCOP 82267 TatD Mg-dependent DNase-like
1 1 SCOP 82283 Homocysteine S-methyltransferase
1 1 SCOP 82371 YbeA-like
1 1 SCOP 82475 MraW-like putative methyltransferases
1 1 SCOP 82550 DegV-like
1 1 SCOP 82661 Poly A polymerase head domain-like
1 1 SCOP 82680 N-utilization substance G protein NusG, N-terminal domain
1 1 SCOP 88683 Eukaryotic ODC-like
1 1 SCOP 88784 rRNA adenine dimethylase-like
1 1 SCOP 89503 Ketopantoate hydroxymethyltransferase PanB
1 1 SCOP 89624 Ribose/Galactose isomerase RpiB/AlsB
1 1 SCOP 89629 tRNA(m1G37)-methyltransferase TrmD
1 1 SCOP 89632 YggJ C-terminal domain-like
1 1 SCOP 89724 Macro domain
1 1 SCOP 90124 ABC transporter transmembrane region
1 1 SCOP 101340 HD domain
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101822 Aminopeptidase/glucanase lid domain
1 1 SCOP 101905 GyrA/ParC C-terminal domain-like
1 1 SCOP 102115 Biotin synthase
1 1 SCOP 102118 Oxygen-independent coproporphyrinogen III oxidase HemN
1 1 SCOP 102304 Homoserine kinase ThrH
1 1 SCOP 102406 MoCo carrier protein-like
1 1 SCOP 102485 Putative Holliday junction resolvase RuvX
1 1 SCOP 102517 N-acetylmuramoyl-L-alanine amidase-like
1 1 SCOP 102575 NOL1/NOP2/sun
1 1 SCOP 102646 CoaB-like
1 1 SCOP 102660 PlsX-like
1 1 SCOP 102663 Phosphotransacetylase
1 1 SCOP 102755 Hsp90 middle domain
1 1 SCOP 102766 Imidazole glycerol phosphate dehydratase
1 1 SCOP 102769 ATP-dependent protease Lon (La), catalytic domain
1 1 SCOP 102772 YigZ N-terminal domain-like
1 1 SCOP 102928 NifU/IscU domain
1 1 SCOP 109725 Conserved carboxylase domain
1 1 SCOP 109756 PhoU-like
1 1 SCOP 110400 ThiG-like
1 1 SCOP 110436 Ornithine cyclodeaminase-like
1 1 SCOP 110636 ROK
1 1 SCOP 110711 Hypothetical protein TT1679
1 1 SCOP 110734 Glycosyl transferases group 1
1 1 SCOP 110910 Monomeric nicotinate phosphoribosyltransferase C-terminal domain
1 1 SCOP 111219 ArgJ-like
1 1 SCOP 111305 Recombination protein RecR
1 1 SCOP 111332 NAD kinase-like
1 1 SCOP 117458 FumA C-terminal domain-like
1 1 SCOP 117984 GGDEF domain
1 1 SCOP 118197 YaeB-like
1 1 SCOP 118216 Proton glutamate symport protein
1 1 SCOP 140292 CodY HTH domain
1 1 SCOP 141735 HisI-like
1 1 SCOP 141755 PdxS-like
1 1 SCOP 142077 HTS-like
1 1 SCOP 142093 ThiI-like
1 1 SCOP 142647 TrmB-like
1 1 SCOP 142696 RibA-like
1 1 SCOP 142701 RibD C-terminal domain-like
1 1 SCOP 142755 NadA-like
1 1 SCOP 143632 ApbE-like
1 1 SCOP 143976 lvD/EDD N-terminal domain-like
1 1 SCOP 143991 YbiA-like
1 1 SCOP 158833 Tex N-terminal region-like
1 1 SCOP 159112 RNB domain-like
1 1 SCOP 159400 Imidazolonepropionase-like
1 1 SCOP 159444 SP0239-like
1 1 SCOP 159584 PTS system, Fructose specific IIB subunit-like
1 1 SCOP 159635 Tex RuvX-like domain-like
1 1 SCOP 159775 YerB-like
1 1 SCOP 160538 SpoVG-like
1 1 SCOP 160984 Diacylglycerol kinase-like
1 1 SCOP 161071 SNF-like

The following families have one or more weak hits: