Family Assignments

Domains Proteins SCOP Link Families
24 24 SCOP 88854 Protein kinases, catalytic subunit
19 17 SCOP 81269 Extended AAA-ATPase domain
17 17 SCOP 52592 G proteins
15 10 SCOP 81268 Tandem AAA-ATPase domain
12 12 SCOP 56251 Proteasome subunits
10 10 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
9 9 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
9 9 SCOP 52686 ABC transporter ATPase domain-like
8 8 SCOP 52641 Motor proteins
6 3 SCOP 53068 Actin/HSP70
5 5 SCOP 54496 UBC-related
5 5 SCOP 56310 Protein serine/threonine phosphatase
3 3 SCOP 52491 Tubulin, GTPase domain
3 3 SCOP 52652 Nitrogenase iron protein-like
3 3 SCOP 52670 RecA protein-like (ATPase-domain)
3 3 SCOP 53417 GABA-aminotransferase-like
3 3 SCOP 55832 Thymidylate synthase/dCMP hydroxymethylase
3 3 SCOP 64485 RNA-polymerase beta
3 3 SCOP 64490 RNA-polymerase beta-prime
2 2 SCOP 47114 Nucleosome core histones
2 2 SCOP 47577 Calponin-homology domain, CH-domain
2 2 SCOP 48372 Armadillo repeat
2 2 SCOP 50448 Elongation factors
2 2 SCOP 50461 Ribosomal protein L3
2 2 SCOP 50490 3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
2 2 SCOP 50678 ValRS/IleRS/LeuRS editing domain
2 2 SCOP 50892 Cyclophilin (peptidylprolyl isomerase)
2 2 SCOP 50979 WD40-repeat
2 2 SCOP 52318 Class I glutamine amidotransferases (GAT)
2 2 SCOP 52541 Nucleotide and nucleoside kinases
2 2 SCOP 52773 Histone deacetylase, HDAC
2 2 SCOP 53461 UDP-glucose pyrophosphorylase
2 1 SCOP 53785 Phosphofructokinase
2 1 SCOP 53902 Thiolase-related
2 2 SCOP 54237 Ubiquitin-related
2 2 SCOP 55308 Tubulin, C-terminal domain
2 2 SCOP 55730 N-acetyl transferase, NAT
2 2 SCOP 55921 Creatinase/aminopeptidase
2 1 SCOP 55946 TATA-box binding protein (TBP), C-terminal domain
2 2 SCOP 56171 Phoshoinositide 3-kinase (PI3K), catalytic domain
2 2 SCOP 56205 Hect, E3 ligase catalytic domain
2 2 SCOP 56673 DNA polymerase I
2 2 SCOP 56816 Sec1/munc18-like (SM) proteins
2 2 SCOP 89125 Nop domain
2 2 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
2 2 SCOP 102575 NOL1/NOP2/sun
2 2 SCOP 143927 beta-CASP RNA-metabolising hydrolases
1 1 SCOP 46610 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 SCOP 47253 Ribonucleotide reductase-like
1 1 SCOP 47371 Bromodomain
1 1 SCOP 47808 5' to 3' exonuclease, C-terminal subdomain
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48020 DNA polymerase III clamp loader subunits, C-terminal domain
1 1 SCOP 48180 Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
1 1 SCOP 48246 Protein prenyltransferases
1 1 SCOP 48446 14-3-3 protein
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50307 DNA ligase/mRNA capping enzyme postcatalytic domain
1 1 SCOP 50325 Inorganic pyrophosphatase
1 1 SCOP 50986 Regulator of chromosome condensation RCC1
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51396 FMN-linked oxidoreductases
1 1 SCOP 51431 Aldo-keto reductases (NADP)
1 1 SCOP 51570 Class I aldolase
1 1 SCOP 51605 Enolase
1 1 SCOP 51622 Pyruvate kinase
1 1 SCOP 51659 Endonuclease IV
1 1 SCOP 51714 tRNA-guanine transglycosylase
1 1 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
1 1 SCOP 51868 6-phosphogluconate dehydrogenase-like, N-terminal domain
1 1 SCOP 51931 GDI-like N domain
1 1 SCOP 52002 R1 subunit of ribonucleotide reductase, C-terminal domain
1 1 SCOP 52034 Group II chaperonin (CCT, TRIC), apical domain
1 1 SCOP 52142 Uracil-DNA glycosylase
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52403 N-type ATP pyrophosphatases
1 1 SCOP 52468 Deoxyhypusine synthase, DHS
1 1 SCOP 52744 Subtilases
1 1 SCOP 52901 Glutathione peroxidase-like
1 1 SCOP 53045 5' to 3' exonuclease catalytic domain
1 1 SCOP 53099 Ribonuclease H
1 1 SCOP 53143 ERF1/Dom34 middle domain-like
1 1 SCOP 53201 Leucine aminopeptidase, C-terminal domain
1 1 SCOP 53342 Fibrillarin homologue
1 1 SCOP 53402 Cystathionine synthase-like
1 1 SCOP 53698 double-SIS domain
1 1 SCOP 53701 Phosphoglucose isomerase, PGI
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53791 Tetrapyrrole methylase
1 1 SCOP 54054 Adenain-like
1 1 SCOP 54193 L15e
1 1 SCOP 54212 Translational machinery components
1 1 SCOP 54224 DNA gyrase/MutL, second domain
1 1 SCOP 54519 Transcriptional factor tubby, C-terminal domain
1 1 SCOP 54687 Ribosomal protein L10e
1 1 SCOP 54720 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 54920 Nucleoside diphosphate kinase, NDK
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55348 GAPDH-like
1 1 SCOP 55482 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 SCOP 55875 Heat shock protein 90, HSP90, N-terminal domain
1 1 SCOP 55879 DNA gyrase/MutL, N-terminal domain
1 1 SCOP 55910 Ribosome anti-association factor eIF6 (aIF6)
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56092 ATP-dependent DNA ligase catalytic domain
1 1 SCOP 56236 Class II glutamine amidotransferases
1 1 SCOP 56554 Insert subdomain of RNA polymerase alpha subunit
1 1 SCOP 56720 Type II DNA topoisomerase
1 1 SCOP 56802 Acetyl-CoA synthetase-like
1 1 SCOP 57799 Casein kinase II beta subunit
1 1 SCOP 57851 RING finger domain, C3HC4
1 1 SCOP 63412 MPP-like
1 1 SCOP 63611 Pumilio repeat
1 1 SCOP 64159 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 SCOP 64162 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
1 1 SCOP 64388 Phoshatidylinositol transfer protein, PITP
1 1 SCOP 69001 FAD-dependent thiol oxidase
1 1 SCOP 69573 Molybdenum cofactor biosynthesis protein MoeB
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 81589 Poly(A) polymerase, PAP, N-terminal domain
1 1 SCOP 81630 Poly(A) polymerase, PAP, middle domain
1 1 SCOP 82267 TatD Mg-dependent DNase-like
1 1 SCOP 82388 Predicted hydrolases Cof
1 1 SCOP 82458 Trunk domain of Sec23/24
1 1 SCOP 82540 Trehalose-6-phosphate synthase, OtsA
1 1 SCOP 82568 Ubiquitin carboxyl-terminal hydrolase, UCH
1 1 SCOP 82583 G domain-linked domain
1 1 SCOP 82645 The homologous-pairing domain of Rad52 recombinase
1 1 SCOP 88735 TK-like Pyr module
1 1 SCOP 88741 Branched-chain alpha-keto acid dehydrogenase Pyr module
1 1 SCOP 88760 TK-like PP module
1 1 SCOP 88766 Branched-chain alpha-keto acid dehydrogenase PP module
1 1 SCOP 88784 rRNA adenine dimethylase-like
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 102492 CAF1-like ribonuclease
1 1 SCOP 102560 mRNA cap (Guanine N-7) methyltransferase
1 1 SCOP 102609 Glycolipid 2-alpha-mannosyltransferase
1 1 SCOP 102755 Hsp90 middle domain
1 1 SCOP 102928 NifU/IscU domain
1 1 SCOP 103366 Hypothetical protein PH1602
1 1 SCOP 103492 Preprotein translocase SecY subunit
1 1 SCOP 117019 ATP-dependent DNA ligase DNA-binding domain
1 1 SCOP 140985 PTPA-like
1 1 SCOP 141436 SSRP1-like
1 1 SCOP 143906 Gamma-glutamyltranspeptidase-like
1 1 SCOP 158742 Trehalase-like
1 1 SCOP 158782 HAT/Suf repeat
1 1 SCOP 159112 RNB domain-like
1 1 SCOP 159638 Prp8 beta-finger domain-like
1 1 SCOP 159697 TRM1-like
1 1 SCOP 160898 Taf5 N-terminal domain-like

The following families have one or more weak hits: