Family Assignments

Domains Proteins SCOP Link Families
18 18 SCOP 52686 ABC transporter ATPase domain-like
13 12 SCOP 81269 Extended AAA-ATPase domain
10 10 SCOP 75648 ABC transporter involved in vitamin B12 uptake, BtuC
9 9 SCOP 52375 Class I aminoacyl-tRNA synthetases (RS), catalytic domain
9 9 SCOP 52652 Nitrogenase iron protein-like
9 9 SCOP 55682 Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
7 7 SCOP 52318 Class I glutamine amidotransferases (GAT)
6 6 SCOP 53402 Cystathionine synthase-like
5 5 SCOP 51396 FMN-linked oxidoreductases
5 5 SCOP 52403 N-type ATP pyrophosphatases
5 5 SCOP 52592 G proteins
5 5 SCOP 53384 AAT-like
5 5 SCOP 53687 Tryptophan synthase beta subunit-like PLP-dependent enzymes
4 4 SCOP 51751 Tyrosine-dependent oxidoreductases
4 2 SCOP 53068 Actin/HSP70
3 3 SCOP 51381 Tryptophan biosynthesis enzymes
3 3 SCOP 51570 Class I aldolase
3 3 SCOP 51830 Formate/glycerate dehydrogenases, NAD-domain
3 3 SCOP 51883 Aminoacid dehydrogenase-like, C-terminal domain
3 3 SCOP 53417 GABA-aminotransferase-like
3 3 SCOP 53791 Tetrapyrrole methylase
3 3 SCOP 53851 Phosphate binding protein-like
3 3 SCOP 55327 PurM N-terminal domain-like
3 3 SCOP 56043 PurM C-terminal domain-like
3 2 SCOP 56067 BC ATP-binding domain-like
3 3 SCOP 142721 PyrH-like
2 2 SCOP 47324 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
2 2 SCOP 48082 Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
2 2 SCOP 48558 L-aspartase/fumarase
2 2 SCOP 48596 Group II chaperonin (CCT, TRIC), ATPase domain
2 2 SCOP 50448 Elongation factors
2 2 SCOP 51367 Histidine biosynthesis enzymes
2 2 SCOP 51691 NadC C-terminal domain-like
2 2 SCOP 52017 LeuD-like
2 2 SCOP 52034 Group II chaperonin (CCT, TRIC), apical domain
2 2 SCOP 52419 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 1 SCOP 52441 BC N-terminal domain-like
2 2 SCOP 52670 RecA protein-like (ATPase-domain)
2 2 SCOP 53045 5' to 3' exonuclease catalytic domain
2 2 SCOP 53272 Phosphoribosyltransferases (PRTases)
2 2 SCOP 53464 glucose-1-phosphate thymidylyltransferase
2 2 SCOP 53620 Thiamin biosynthesis kinases
2 2 SCOP 53660 Dimeric isocitrate & isopropylmalate dehydrogenases
2 2 SCOP 53672 Aspartate/ornithine carbamoyltransferase
2 2 SCOP 53721 ALDH-like
2 2 SCOP 53733 Aconitase iron-sulfur domain
2 1 SCOP 53902 Thiolase-related
2 2 SCOP 54224 DNA gyrase/MutL, second domain
2 2 SCOP 54229 Ribonuclease PH domain 1-like
2 2 SCOP 55094 Methyl-coenzyme M reductase alpha and beta chain N-terminal domain
2 2 SCOP 55348 GAPDH-like
2 2 SCOP 55921 Creatinase/aminopeptidase
2 2 SCOP 56236 Class II glutamine amidotransferases
2 2 SCOP 56251 Proteasome subunits
2 2 SCOP 56323 ADC synthase
2 2 SCOP 56656 Inositol monophosphatase/fructose-1,6-bisphosphatase-like
2 2 SCOP 56673 DNA polymerase I
2 2 SCOP 64490 RNA-polymerase beta-prime
2 2 SCOP 69599 mono-SIS domain
2 2 SCOP 75099 Monomethylamine methyltransferase MtmB
2 2 SCOP 88724 Pyruvate oxidase and decarboxylase Pyr module
2 2 SCOP 88749 Pyruvate oxidase and decarboxylase PP module
2 2 SCOP 101340 HD domain
2 2 SCOP 110513 IF2B-like
2 2 SCOP 143812 GatB/GatE catalytic domain-like
2 1 SCOP 143860 Polyphosphate kinase C-terminal domain
2 2 SCOP 143927 beta-CASP RNA-metabolising hydrolases
2 2 SCOP 158600 MgsA/YrvN C-terminal domain-like
2 2 SCOP 160804 PurP ATP-binding domain-like
1 1 SCOP 46566 Chaperone J-domain
1 1 SCOP 47241 Ferritin
1 1 SCOP 47965 Transcription factor IIB (TFIIB), core domain
1 1 SCOP 47974 Ribosomal protein S7
1 1 SCOP 48141 Ribosomal protein L19 (L19e)
1 1 SCOP 48184 Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI)
1 1 SCOP 48577 Isoprenyl diphosphate synthases
1 1 SCOP 49368 Superoxide reductase-like
1 1 SCOP 50114 C-terminal domain of ribosomal protein L2
1 1 SCOP 50194 Ribosomal protein L14
1 1 SCOP 50277 Myf domain
1 1 SCOP 50282 Cold shock DNA-binding domain-like
1 1 SCOP 50307 DNA ligase/mRNA capping enzyme postcatalytic domain
1 1 SCOP 50325 Inorganic pyrophosphatase
1 1 SCOP 50461 Ribosomal protein L3
1 1 SCOP 50466 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
1 1 SCOP 50490 3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
1 1 SCOP 50678 ValRS/IleRS/LeuRS editing domain
1 1 SCOP 50892 Cyclophilin (peptidylprolyl isomerase)
1 1 SCOP 51183 dTDP-sugar isomerase
1 1 SCOP 51352 Triosephosphate isomerase (TIM)
1 1 SCOP 51372 D-ribulose-5-phosphate 3-epimerase
1 1 SCOP 51375 Decarboxylase
1 1 SCOP 51392 Thiamin phosphate synthase
1 1 SCOP 51420 Alanine racemase-like, N-terminal domain
1 1 SCOP 51431 Aldo-keto reductases (NADP)
1 1 SCOP 51594 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
1 1 SCOP 51605 Enolase
1 1 SCOP 51650 RuBisCo, large subunit, C-terminal domain
1 1 SCOP 51659 Endonuclease IV
1 1 SCOP 51714 tRNA-guanine transglycosylase
1 1 SCOP 51718 Dihydropteroate synthetase
1 1 SCOP 51800 Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
1 1 SCOP 51868 6-phosphogluconate dehydrogenase-like, N-terminal domain
1 1 SCOP 52022 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 SCOP 52043 Ribosomal protein L32e
1 1 SCOP 52147 Mug-like
1 1 SCOP 52162 Ribosomal protein L13
1 1 SCOP 52167 Ribosomal protein L4
1 1 SCOP 52211 Succinyl-CoA synthetase domains
1 1 SCOP 52256 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 SCOP 52300 S-adenosylhomocystein hydrolase
1 1 SCOP 52314 Ribosomal protein S2
1 1 SCOP 52397 Adenylyltransferase
1 1 SCOP 52468 Deoxyhypusine synthase, DHS
1 1 SCOP 52491 Tubulin, GTPase domain
1 1 SCOP 52508 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 SCOP 52541 Nucleotide and nucleoside kinases
1 1 SCOP 52769 Arginase-like amidino hydrolases
1 1 SCOP 52955 Anticodon-binding domain of Class II aaRS
1 1 SCOP 52973 ITPase (Ham1)
1 1 SCOP 53099 Ribonuclease H
1 1 SCOP 53138 Ribosomal protein L18 and S11
1 1 SCOP 53168 Purine and uridine phosphorylases
1 1 SCOP 53204 Bacterial dinuclear zinc exopeptidases
1 1 SCOP 53224 Aminoacid dehydrogenases
1 1 SCOP 53235 Tetrahydrofolate dehydrogenase/cyclohydrolase
1 1 SCOP 53240 Malic enzyme N-domain
1 1 SCOP 53255 Cofactor-dependent phosphoglycerate mutase
1 1 SCOP 53339 RNA methyltransferase FtsJ
1 1 SCOP 53342 Fibrillarin homologue
1 1 SCOP 53629 Folylpolyglutamate synthetase
1 1 SCOP 53749 Phosphoglycerate kinase
1 1 SCOP 53775 Glutaminase/Asparaginase
1 1 SCOP 54193 L15e
1 1 SCOP 54232 GHMP Kinase, N-terminal domain
1 1 SCOP 54687 Ribosomal protein L10e
1 1 SCOP 54811 GMP synthetase C-terminal dimerisation domain
1 1 SCOP 54827 Enolase N-terminal domain-like
1 1 SCOP 54844 Ribosomal protein L22
1 1 SCOP 54920 Nucleoside diphosphate kinase, NDK
1 1 SCOP 55069 Peptide methionine sulfoxide reductase
1 1 SCOP 55089 Methyl-coenzyme M reductase gamma chain
1 1 SCOP 55130 Ribosomal protein L30p/L7e
1 1 SCOP 55187 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
1 1 SCOP 55206 RNA 3'-terminal phosphate cyclase, RPTC
1 1 SCOP 55209 Enolpyruvate transferase, EPT
1 1 SCOP 55262 GAD domain
1 1 SCOP 55283 Ribosomal protein L5
1 1 SCOP 55299 YjgF/L-PSP
1 1 SCOP 55316 L30e/L7ae ribosomal proteins
1 1 SCOP 55822 YrdC-like
1 1 SCOP 55827 YbaK/ProRS associated domain
1 1 SCOP 55875 Heat shock protein 90, HSP90, N-terminal domain
1 1 SCOP 55879 DNA gyrase/MutL, N-terminal domain
1 1 SCOP 55910 Ribosome anti-association factor eIF6 (aIF6)
1 1 SCOP 55946 TATA-box binding protein (TBP), C-terminal domain
1 1 SCOP 56048 Ribosomal protein S8
1 1 SCOP 56092 ATP-dependent DNA ligase catalytic domain
1 1 SCOP 56096 Adenylation domain of NAD+-dependent DNA ligase
1 1 SCOP 56105 SAICAR synthase
1 1 SCOP 56248 Penicillin V acylase
1 1 SCOP 56291 ROO N-terminal domain-like
1 1 SCOP 56543 Substrate-binding domain of HMG-CoA reductase
1 1 SCOP 56635 Heme-dependent catalases
1 1 SCOP 56713 Prokaryotic type I DNA topoisomerase
1 1 SCOP 56720 Type II DNA topoisomerase
1 1 SCOP 56727 DNA topoisomerase IV, alpha subunit
1 1 SCOP 56753 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 SCOP 56809 Ribosomal protein L1
1 1 SCOP 63966 Precorrin-8X methylmutase CbiC/CobH
1 1 SCOP 63971 Inosicase
1 1 SCOP 64006 Undecaprenyl diphosphate synthase
1 1 SCOP 64198 AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC
1 1 SCOP 64372 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
1 1 SCOP 64485 RNA-polymerase beta
1 1 SCOP 69337 Alpha subunit of glutamate synthase, C-terminal domain
1 1 SCOP 69427 UDP-galactopyranose mutase, N-terminal domain
1 1 SCOP 69602 L-histidinol dehydrogenase HisD
1 1 SCOP 69746 Pseudouridine synthase II TruB
1 1 SCOP 69865 Argininosuccinate synthetase, C-terminal domain
1 1 SCOP 69892 Iron-containing alcohol dehydrogenase
1 1 SCOP 74911 Aldose 1-epimerase (mutarotase)
1 1 SCOP 75041 SelR domain
1 1 SCOP 75073 Hydantoinase (dihydropyrimidinase), catalytic domain
1 1 SCOP 75292 YjeF C-terminal domain-like
1 1 SCOP 75297 N-acetyl-l-glutamate kinase
1 1 SCOP 75305 Amidase signature (AS) enzymes
1 1 SCOP 81268 Tandem AAA-ATPase domain
1 1 SCOP 81902 HCP-like
1 1 SCOP 82258 SAH/MTA deaminase-like
1 1 SCOP 88683 Eukaryotic ODC-like
1 1 SCOP 88760 TK-like PP module
1 1 SCOP 89125 Nop domain
1 1 SCOP 89332 DNA replication initiator (cdc21/cdc54) N-terminal domain
1 1 SCOP 100921 Heat shock protein 70kD (HSP70), peptide-binding domain
1 1 SCOP 101354 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 SCOP 101822 Aminopeptidase/glucanase lid domain
1 1 SCOP 101905 GyrA/ParC C-terminal domain-like
1 1 SCOP 102317 NagD-like
1 1 SCOP 102463 Peptidyl-tRNA hydrolase II
1 1 SCOP 102755 Hsp90 middle domain
1 1 SCOP 102928 NifU/IscU domain
1 1 SCOP 103264 Chorismate synthase, AroC
1 1 SCOP 103366 Hypothetical protein PH1602
1 1 SCOP 103492 Preprotein translocase SecY subunit
1 1 SCOP 110400 ThiG-like
1 1 SCOP 111219 ArgJ-like
1 1 SCOP 111250 Sulfolobus fructose-1,6-bisphosphatase-like
1 1 SCOP 111322 AF1104-like
1 1 SCOP 111332 NAD kinase-like
1 1 SCOP 111343 CbiD-like
1 1 SCOP 111353 Ammonium transporter
1 1 SCOP 117458 FumA C-terminal domain-like
1 1 SCOP 118162 Tpt1/KptA
1 1 SCOP 141735 HisI-like
1 1 SCOP 141755 PdxS-like
1 1 SCOP 142077 HTS-like
1 1 SCOP 142434 CinA-like
1 1 SCOP 142536 AF0625-like
1 1 SCOP 142606 N-6 DNA Methylase-like
1 1 SCOP 142622 Met-10+ protein-like
1 1 SCOP 142701 RibD C-terminal domain-like
1 1 SCOP 142755 NadA-like
1 1 SCOP 143448 AMMECR1-like
1 1 SCOP 143916 RNase Z-like
1 1 SCOP 143976 lvD/EDD N-terminal domain-like
1 1 SCOP 144028 Nqo4-like
1 1 SCOP 144031 Nq06-like
1 1 SCOP 158338 Rps19E-like
1 1 SCOP 158706 Achaeal helicase C-terminal domain
1 1 SCOP 159154 CTP-dependent riboflavin kinase-like
1 1 SCOP 159444 SP0239-like
1 1 SCOP 159518 AF1056-like
1 1 SCOP 159523 AF0751-like
1 1 SCOP 159697 TRM1-like
1 1 SCOP 160566 DVU1097-like
1 1 SCOP 160976 AF1531-like

The following families have one or more weak hits: